RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 HOXA6P31267 233 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 NOS2P35228 1153 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 TIE1P35590 1138 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 RNASE9P60153 205 aaKnown RBP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 DMC1Q14565 340 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 HSF5Q4G112 596 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 XYLT1Q86Y38 959 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 SFTPA1Q8IWL2 248 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 CCDC33Q8N5R6 958 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 ZBTB44Q8NCP5 570 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 KCNV2Q8TDN2 545 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 NELL1Q92832 810 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 RNF34Q969K3 372 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 AGPAT1Q99943 283 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 SLC2A11Q9BYW1 496 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 IRX2Q9BZI1 471 aaPredicted RBP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 DDIT4Q9NX09 232 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 RRN3Q9NYV6 651 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.48■□□□□ 0.23
TUBB3-214ENST00000557490 FBXO10Q9UK96 956 aa16.48■□□□□ 0.23
TUBB3-214ENST00000557490 SYNJ2BP-COX16A0A087WUM0 186 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 GOLGA6L7A0A1B0GV03 622 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 GOLGA8SH3BPF8 625 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 KLF8O95600 359 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-214ENST00000557490 CISD3P0C7P0 127 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 MATKP42679 507 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 NSFP46459 744 aaKnown RBP16.47■□□□□ 0.23
TUBB3-214ENST00000557490 FNTBP49356 437 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 PITX1P78337 314 aaPredicted RBP16.47■□□□□ 0.23
TUBB3-214ENST00000557490 ASIC2Q16515 512 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 EOGTQ5NDL2 527 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 EMC10Q5UCC4 262 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 HEATR6Q6AI08 1181 aaKnown RBP16.47■□□□□ 0.23
TUBB3-214ENST00000557490 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 MMS22LQ6ZRQ5 1243 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 TRMT11Q7Z4G4 463 aaKnown RBP16.47■□□□□ 0.23
TUBB3-214ENST00000557490 LONP2Q86WA8 852 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 CAMKK1Q8N5S9 505 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 ALLCQ8N6M5 410 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 ATP6V0D2Q8N8Y2 350 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 BAP1Q92560 729 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 PCDHB18PQ96TA0 734 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 NUP58Q9BVL2 599 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 EPC1Q9H2F5 836 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.47■□□□□ 0.234e-7■■■□□ 18.7
TUBB3-214ENST00000557490 COX16Q9P0S2 106 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 STAP1Q9ULZ2 295 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 MMP17Q9ULZ9 603 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 SLC27A6Q9Y2P4 619 aa16.47■□□□□ 0.23
TUBB3-214ENST00000557490 FLNBO75369 2602 aaKnown RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 TYW5A2RUC4 315 aaKnown RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 LRRC53A6NM62 1247 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 M0QYT0 321 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 GFRA2O00451 464 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 SLC30A4O14863 429 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 TPM3P06753 285 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 ABCB4P21439 1286 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 MMP8P22894 467 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 CCR1P32246 355 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 KIR2DL1P43626 348 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 NME3Q13232 169 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 FAM133BQ5BKY9 247 aaKnown RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 PIK3R6Q5UE93 754 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 SFMBT2Q5VUG0 894 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 RFWD3Q6PCD5 774 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 ZNF513Q8N8E2 541 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 IL17RCQ8NAC3 791 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 TXNDC5Q8NBS9 432 aaKnown RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 HJURPQ8NCD3 748 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 SLC30A5Q8TAD4 765 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 P2RY11Q96G91 374 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 BTN2A3PQ96KV6 586 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 HHIPQ96QV1 700 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 POLR3BQ9NW08 1133 aaPredicted RBP16.46■□□□□ 0.23
TUBB3-214ENST00000557490 TMEM51Q9NW97 253 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 ANGPTL2Q9UKU9 493 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
TUBB3-214ENST00000557490 MYOFQ9NZM1 2061 aa16.46■□□□□ 0.22
TUBB3-214ENST00000557490 ANTXRLA6NF34 631 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 TBL1XO60907 577 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 LILRB5O75023 590 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 APBB3O95704 486 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-214ENST00000557490 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 HOXD9P28356 352 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-214ENST00000557490 SLC6A4P31645 630 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 SULT1E1P49888 294 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 MTA1Q13330 715 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-214ENST00000557490 FIGNQ5HY92 759 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 MPP7Q5T2T1 576 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 NADSYN1Q6IA69 706 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 SDE2Q6IQ49 451 aa16.45■□□□□ 0.22
TUBB3-214ENST00000557490 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
TUBB3-214ENST00000557490 IRF2BP2Q7Z5L9 587 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms