RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ARHGAP39Q9C0H5 1083 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 UBA5Q9GZZ9 404 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 USP29Q9HBJ7 922 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 IFT80Q9P2H3 777 aaPredicted RBP5.23□□□□□ -1.57
PRPF39-212ENST00000557477 RCE1Q9Y256 329 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ABCA8O94911 1581 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 SPATA31D1Q6ZQQ2 1576 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 BCORL1Q5H9F3 1711 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 AKNAQ7Z591 1439 aa5.23□□□□□ -1.57
PRPF39-212ENST00000557477 ADAMTSL3P82987 1691 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 A0A1B0GVC2 190 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CCDC151A5D8V7 595 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 AGAP5A6NIR3 686 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 TFRCP02786 760 aaKnown RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 MYCLP12524 364 aaPredicted RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 APEHP13798 732 aaKnown RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 KRT4P19013 534 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 MMP8P22894 467 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CCR5P51681 352 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 RBM5P52756 815 aaKnown RBP eCLIP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CYP4F2P78329 520 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 SIM1P81133 766 aaPredicted RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 TAP1Q03518 808 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CCDC15Q0P6D6 951 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 SLC12A1Q13621 1099 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 LRRC24Q50LG9 513 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 AARS2Q5JTZ9 985 aaKnown RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 PCID2Q5JVF3 399 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 NAPRTQ6XQN6 538 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 SFTPA1Q8IWL2 248 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 TMEM57Q8N5G2 664 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 NGDNQ8NEJ9 315 aaKnown RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 TRMT61AQ96FX7 289 aaKnown RBP5.22□□□□□ -1.57
PRPF39-212ENST00000557477 FAR2Q96K12 515 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 TWNKQ96RR1 684 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CDCP1Q9H5V8 836 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 RMI1Q9H9A7 625 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 RASSF1Q9NS23 344 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 ARAP3Q8WWN8 1544 aa5.22□□□□□ -1.57
PRPF39-212ENST00000557477 CFAP74Q9C0B2 1584 aa5.21□□□□□ -1.57
PRPF39-212ENST00000557477 NEO1Q92859 1461 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 STX16-NPEPL1H3BU86 382 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 STX16O14662 325 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ZNF213O14771 459 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 FAM163BP0C2L3 166 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 TNFRSF1AP19438 455 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 CXCR5P32302 372 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 MCM7P33993 719 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 COPB1P53618 953 aaKnown RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 FOXL2P58012 376 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 TAS2R50P59544 299 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 RBM6P78332 1123 aaKnown RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 CBFBQ13951 182 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 SLC4A8Q2Y0W8 1093 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D25Q3MII6 688 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ZNF484Q5JVG2 852 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 MTHFD1LQ6UB35 978 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 RASGRP2Q7LDG7 609 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 RASAL3Q86YV0 1011 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ESX1Q8N693 406 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 LINC01465Q8N7H1 131 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 C12orf76Q8N812 135 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 FAM71DQ8N9W8 422 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 OR52L2PQ8NGH6 319 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 CLEC4CQ8WTT0 213 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 GLMPQ8WWB7 406 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 NEU4Q8WWR8 484 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 MAELQ96JY0 434 aaKnown RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 SNX18Q96RF0 628 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ELOVL1Q9BW60 279 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 CINPQ9BW66 212 aaPredicted RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 KRTAP9-3Q9BYQ3 159 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 CIPCQ9C0C6 399 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ABHD10Q9NUJ1 306 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ANAPC4Q9UJX5 808 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 SLC12A4Q9UP95 1085 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 DNAJC16Q9Y2G8 782 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 DERAQ9Y315 318 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 RRP7AQ9Y3A4 280 aaKnown RBP5.21□□□□□ -1.58
PRPF39-212ENST00000557477 PCDHA10Q9Y5I2 948 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 ZFYVE16Q7Z3T8 1539 aa5.21□□□□□ -1.58
PRPF39-212ENST00000557477 DENND4BO75064 1496 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ABCA9Q8IUA7 1624 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 RAPGEF6Q8TEU7 1601 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 EFCAB5A4FU69 1503 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3DA0A087WVF3 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3IA0A087WXS9 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3EA0A087X179 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3KA0A087X1G2 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3BA6NDS4 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3FA6NER0 549 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 MBD3L5A6NJ08 208 aaPredicted RBP5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3LB9A6J9 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ORC4O43929 436 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 TBC1D3HP0C7X1 549 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 GRK5P34947 590 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 JAK3P52333 1124 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 UBE3AQ05086 875 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 ABHD18Q0P651 414 aa5.2□□□□□ -1.58
PRPF39-212ENST00000557477 GAB1Q13480 694 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms