RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 NOD2Q9HC29 1040 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 ABCF3Q9NUQ8 709 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 TBC1D14Q9P2M4 693 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 CAPN11Q9UMQ6 739 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 CNTN6Q9UQ52 1028 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 HPSEQ9Y251 543 aa3.45□□□□□ -1.86
HMGB1P14-201ENST00000557424 PNPLA7Q6ZV29 1317 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CCDC78A2IDD5 438 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GTPBP10A4D1E9 387 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 NPIPB15A6NHN6 443 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 MARCH11A6NNE9 402 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GTPBP1O00178 669 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 LEFTY2O00292 366 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 RTCAO00442 366 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 SH2B2O14492 632 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 DCLK1O15075 740 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 VILLO15195 856 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CCP110O43303 1012 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 RRP9O43818 475 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PEX1O43933 1283 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 COQ9O75208 318 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 VPS4BO75351 444 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 NCR1O76036 304 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CER1O95813 267 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GLP2RO95838 553 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 SCGB1D1O95968 90 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 UBL4AP11441 157 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 FCER1AP12319 257 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 C6P13671 934 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 TPH1P17752 444 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GARSP41250 739 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PXNP49023 591 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 NDUFV1P49821 464 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CHAF1BQ13112 559 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 RESTQ13127 1097 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 MPP3Q13368 585 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 TUBB3Q13509 450 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PUM1Q14671 1186 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 ANKRD1Q15327 319 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CDSNQ15517 529 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 MED22Q15528 200 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 NFIL3Q16649 462 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 TMEM266Q2M3C6 531 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 TRIM60Q495X7 471 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 BMP2KLQ5H9B9 411 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CACHD1Q5VU97 1274 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 IL27RAQ6UWB1 636 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 RAB11FIP2Q7L804 512 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GPR149Q86SP6 731 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 HSCBQ8IWL3 235 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 AVL9Q8NBF6 648 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PDPRQ8NCN5 879 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CUL5Q93034 780 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CAVIN3Q969G5 261 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 FUBP1Q96AE4 644 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 TBC1D31Q96DN5 1066 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 RBM17Q96I25 401 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PGBD1Q96JS3 809 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 KLHL32Q96NJ5 620 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 FUZQ9BT04 418 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 ANKRD2Q9GZV1 360 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 FAM83DQ9H4H8 585 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PDE7BQ9NP56 450 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 DECR2Q9NUI1 292 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 C5AR2Q9P296 337 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 LRIT1Q9P2V4 623 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 DNMT3BQ9UBC3 853 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 SEL1LQ9UBV2 794 aa3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 CORO1CQ9ULV4 474 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 C19orf53Q9UNZ5 99 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 WDR33Q9C0J8 1336 aaKnown RBP3.44□□□□□ -1.86
HMGB1P14-201ENST00000557424 PNMA6EA0A0J9YXQ4 647 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 LOC102723971A0A1B0GUV8 181 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 OR2W5A6NFC9 320 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 AQP7P3A6NL99 342 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 GRXCR1A8MXD5 290 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 AHRRA9YTQ3 701 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 GCOM1H8Y6P7 765 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 M0QYT0 321 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 AGPSO00116 658 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 PEX12O00623 359 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 TNPO2O14787 897 aaKnown RBP3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 HEXIM1O94992 359 aaKnown RBP3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 ONECUT2O95948 504 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 C1SP09871 688 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 FAM200BP0CF97 657 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 NR2F1P10589 423 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 INSRRP14616 1297 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 CHRM3P20309 590 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 SLC6A2P23975 617 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 NNMTP40261 264 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 PAFAH1B1P43034 410 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 MMP14P50281 582 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 TOB1P50616 345 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 INHBCP55103 352 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 FAM3BP58499 235 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 KRT17Q04695 432 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 C17orf67Q0P5P2 114 aa3.43□□□□□ -1.86
HMGB1P14-201ENST00000557424 STK4Q13043 487 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms