RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 FYNP06241 537 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 ATP5BP06576 529 aaKnown RBP14.33□□□□□ -0.12
VPS33B-206ENST00000557358 MMEP08473 750 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 CISD3P0C7P0 127 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 MATKP42679 507 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 GABRB2P47870 512 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 NME3Q13232 169 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 CDH18Q13634 790 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 ZC3H12AQ5D1E8 599 aaKnown RBP14.33□□□□□ -0.12
VPS33B-206ENST00000557358 RABGAP1LQ5R372 815 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 ACBD5Q5T8D3 534 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-206ENST00000557358 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 SYPL2Q5VXT5 272 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 CHSY1Q86X52 802 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 MFN1Q8IWA4 741 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 AHI1Q8N157 1196 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 CPA5Q8WXQ8 436 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 RTN4Q9NQC3 1192 aaKnown RBP14.33□□□□□ -0.12
VPS33B-206ENST00000557358 C2orf42Q9NWW7 574 aa14.33□□□□□ -0.12
VPS33B-206ENST00000557358 A0A1W2PQC6 194 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 TCRBV21S2A2A0A5A6 115 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 ANKRD62A6NC57 917 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 GOLGA8SH3BPF8 625 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 M0QYT0 321 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 SGK1O00141 431 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 HRO43593 1189 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 HNRNPLP14866 589 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS33B-206ENST00000557358 HOXD9P28356 352 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-206ENST00000557358 OXCT1P55809 520 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 NOMO3P69849 1222 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 DMWDQ09019 674 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 TTC39BQ5VTQ0 682 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-206ENST00000557358 EGFLAMQ63HQ2 1017 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 RFWD3Q6PCD5 774 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 SUMF1Q8NBK3 374 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 HMGB4Q8WW32 186 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 DDX1Q92499 740 aaKnown RBP14.32□□□□□ -0.12
VPS33B-206ENST00000557358 SLC39A13Q96H72 371 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 HSD3B7Q9H2F3 369 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 WDCPQ9H6R7 721 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 ELOVL2Q9NXB9 296 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 STIM2Q9P246 746 aa14.32□□□□□ -0.12
VPS33B-206ENST00000557358 NOCTQ9UK39 431 aaKnown RBP14.32□□□□□ -0.12
VPS33B-206ENST00000557358 EP300Q09472 2414 aaPredicted RBP14.31□□□□□ -0.12
VPS33B-206ENST00000557358 RALGAPA1Q6GYQ0 2036 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 KCNU1A8MYU2 1149 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 PRRT4C9JH25 899 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 H0Y626 953 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 TRIM24O15164 1050 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 EPHB6O15197 1021 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 MAP3K13O43283 966 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 FOXD2O60548 495 aaPredicted RBP14.31□□□□□ -0.12
VPS33B-206ENST00000557358 IGLV3-25P01717 112 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 CALB1P05937 261 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 RETP07949 1114 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 PABPC1P11940 636 aaKnown RBP14.31□□□□□ -0.12
VPS33B-206ENST00000557358 POLR2EP19388 210 aaKnown RBP14.31□□□□□ -0.12
VPS33B-206ENST00000557358 SULT1E1P49888 294 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 ST8SIA6P61647 398 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 MESP2Q0VG99 397 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 IQCB1Q15051 598 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 TAF5Q15542 800 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 LPAL2Q16609 132 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 MS4A13Q5J8X5 152 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 BRMS1LQ5PSV4 323 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 SERPINA13PQ6UXR4 307 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 XYLT1Q86Y38 959 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 LGI2Q8N0V4 545 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 CARNMT1Q8N4J0 409 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 IQCDQ96DY2 449 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 PIWIL1Q96J94 861 aaKnown RBP14.31□□□□□ -0.12
VPS33B-206ENST00000557358 LOXL4Q96JB6 756 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 CBX8Q9HC52 389 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 GGA2Q9UJY4 613 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 SDK1Q7Z5N4 2213 aa14.31□□□□□ -0.12
VPS33B-206ENST00000557358 A0A1B0GTH6 734 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 GOLGA6L7A0A1B0GV03 622 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 LRP3O75074 770 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 ZNF217O75362 1048 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 CYP1A1P04798 512 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 TACR2P21452 398 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 TNFAIP3P21580 790 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 WASP42768 502 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 UBASH3AP57075 661 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 FMO1Q01740 532 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 ASIC2Q16515 512 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 GEN1Q17RS7 908 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 SLC25A52Q3SY17 297 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 FNDC3BQ53EP0 1204 aaKnown RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 FAM133BQ5BKY9 247 aaKnown RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 RAP1GAP2Q684P5 730 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 LRRC31Q6UY01 552 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 MMS22LQ6ZRQ5 1243 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 ARCQ7LC44 396 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 APTXQ7Z2E3 356 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms