RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 MS4A13Q5J8X5 152 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 BRMS1LQ5PSV4 323 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 NADSYN1Q6IA69 706 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 SDE2Q6IQ49 451 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 ACAD10Q6JQN1 1059 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 LONP2Q86WA8 852 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 ZBTB44Q8NCP5 570 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 UCMAQ8WVF2 138 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 NKD2Q969F2 451 aaPredicted RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 NT5C3BQ969T7 300 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 METTL5Q9NRN9 209 aaKnown RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 TMEM59LQ9UK28 342 aa12.95□□□□□ -0.34
SLIRP-209ENST00000557342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.346e-18■□□□□ 8
SLIRP-209ENST00000557342 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
SLIRP-209ENST00000557342 FAM170AA1A519 330 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 F5H5T6 163 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 NPC1O15118 1278 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 TRIM24O15164 1050 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 TIMM44O43615 452 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 TBL1XO60907 577 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 LILRB5O75023 590 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-209ENST00000557342 APBB3O95704 486 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 TACR2P21452 398 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 CNR2P34972 360 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 DGKEP52429 567 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 ZBED6P86452 979 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 DEUP1Q05D60 604 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 EIF4HQ15056 248 aaKnown RBP12.94□□□□□ -0.34
SLIRP-209ENST00000557342 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
SLIRP-209ENST00000557342 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 RFWD3Q6PCD5 774 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 MON1BQ7L1V2 547 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 CHSY1Q86X52 802 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 SFTPA1Q8IWL2 248 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 CCDC33Q8N5R6 958 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SLIRP-209ENST00000557342 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 WFIKKN2Q8TEU8 576 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 SYT11Q9BT88 431 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 C2orf42Q9NWW7 574 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 CAPN11Q9UMQ6 739 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 R4GN57 208 aa12.94□□□□□ -0.34
SLIRP-209ENST00000557342 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 PRRT4C9JH25 899 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 KRT3P12035 628 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 GZMAP12544 262 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 HNRNPLP14866 589 aaKnown RBP eCLIP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 NTSR1P30989 418 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 SDC4P31431 198 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 RDXP35241 583 aaKnown RBP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 FLT3P36888 993 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 FNTBP49356 437 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 CXCR3P49682 368 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 PTP4A2Q12974 167 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 TRIM14Q14142 442 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 CRY1Q16526 586 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 TTC39BQ5VTQ0 682 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 RAP1GAP2Q684P5 730 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 RNF43Q68DV7 783 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 VPS36Q86VN1 386 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 WDR5BQ86VZ2 330 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 MFN1Q8IWA4 741 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 AHI1Q8N157 1196 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 TSTD1Q8NFU3 115 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 CPLX3Q8WVH0 158 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 TBCBQ99426 244 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 POLMQ9NP87 494 aaPredicted RBP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 ARHGEF38Q9NXL2 777 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 STIM2Q9P246 746 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 EBF1Q9UH73 591 aa12.93□□□□□ -0.34
SLIRP-209ENST00000557342 XPO7Q9UIA9 1087 aaKnown RBP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 LUC7L2Q9Y383 392 aaKnown RBP12.93□□□□□ -0.34
SLIRP-209ENST00000557342 DOCK4Q8N1I0 1966 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 ANKRD62A6NC57 917 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 SIGLEC16A6NMB1 481 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 SGK1O00141 431 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 DESP17661 470 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 SGSHP51688 502 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms