RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PDCL3Q9H2J4 239 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 AGO3Q9H9G7 860 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 TMEM8AQ9HCN3 771 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ZCCHC17Q9NP64 241 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 SIX2Q9NPC8 291 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 ERAP1Q9NZ08 941 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 SUCLA2Q9P2R7 463 aaPredicted RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 RNF14Q9UBS8 474 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 AGO2Q9UKV8 859 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 SRPK3Q9UPE1 567 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 COQ4Q9Y3A0 265 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 DMRT1Q9Y5R6 373 aa4.77□□□□□ -1.65
SRP54-212ENST00000556992 RANBP2P49792 3224 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 BAZ2BQ9UIF8 2168 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 MKI67P46013 3256 aaKnown RBP4.77□□□□□ -1.65
SRP54-212ENST00000556992 FOCADQ5VW36 1801 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 EMSYQ7Z589 1322 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ADAMTSL1Q8N6G6 1762 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TCHHQ07283 1943 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 A0A087X0T9 212 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 A0A0A6YYK5 440 aaPredicted RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 IGKV6-21A0A0C4DH24 114 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 MACROD2A1Z1Q3 448 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GOLGA8IPA6NC78 632 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PRAMEF25A6NGN4 478 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 MANSC4A6NHS7 340 aaPredicted RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 LRRIQ4A6NIV6 560 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GOLGA8JA6NMD2 632 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 F8VZ95 297 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 FOXN3O00409 490 aaPredicted RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 MAN2B1O00754 1011 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ZNF263O14978 683 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CLDN3O15551 220 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TOM1L1O75674 476 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 AMY2AP04746 511 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 H2AFZP0C0S5 128 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 FAM228BP0C875 321 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TRIM49P0CI25 452 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TRIM49CP0CI26 452 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SRGAP2CP0DJJ0 459 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TCP1P17987 556 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 KRT4P19013 534 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 AMY2BP19961 511 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TNFAIP3P21580 790 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 MCM3P25205 808 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TMOD1P28289 359 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 RPS19P39019 145 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 MXI1P50539 228 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GPC3P51654 580 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SOX10P56693 466 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 HUNKP57058 714 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CD83Q01151 205 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 POU5F1Q01860 360 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 APBA1Q02410 837 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 CYP24A1Q07973 514 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 NCBP1Q09161 790 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 LAMTOR4Q0VGL1 99 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GRM1Q13255 1194 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PRPF4BQ13523 1007 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 NFYCQ13952 458 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 KIF22Q14807 665 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GRM7Q14831 915 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PSMD6Q15008 389 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PLCB4Q15147 1175 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 MAPK6Q16659 721 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 KYAT1Q16773 422 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 FAM110CQ1W6H9 321 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ERCC6LQ2NKX8 1250 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 HSDL1Q3SXM5 330 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CBWD6Q4V339 395 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 EPC2Q52LR7 807 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CBWD3Q5JTY5 395 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CBWD5Q5RIA9 395 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 C1orf220Q5T0J3 134 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CST9Q5W186 159 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CCDC70Q6NSX1 233 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TAPT1Q6NXT6 567 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ALKBH5Q6P6C2 394 aaKnown RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 H2AFVQ71UI9 128 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ARMCX2Q7L311 632 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 ZNF571Q7Z3V5 609 aaPredicted RBP4.76□□□□□ -1.65
SRP54-212ENST00000556992 MRGPRGQ86SM5 289 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 OSTM1Q86WC4 334 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 CBWD2Q8IUF1 395 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 D2HGDHQ8N465 521 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SMC1BQ8NDV3 1235 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 FBXL13Q8NEE6 735 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 PPTC7Q8NI37 304 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SLC30A5Q8TAD4 765 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 GOLGA1Q92805 767 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SAAL1Q96ER3 474 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 SCYL1Q96KG9 808 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 FNBP1Q96RU3 617 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 AGPAT1Q99943 283 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TINF2Q9BSI4 451 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 TCHPQ9BT92 498 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 MSTO1Q9BUK6 570 aa4.76□□□□□ -1.65
SRP54-212ENST00000556992 KIFC3Q9BVG8 833 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms