RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 A0A1B0GVM2 712 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 A0A1W2PR77 199 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 NEMP2A6NFY4 417 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 FAM47DPA6NHR8 397 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 LRRC72A6NJI9 287 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 HUS1O60921 280 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 LILRA1O75019 489 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 WNT1P04628 370 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 HMGB1P09429 215 aaKnown RBP6.07□□□□□ -1.44
ATXN3-245ENST00000556958 SPATA31C1P0DKV0 1188 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 LIPCP11150 499 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 SLC5A2P31639 672 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 PNPLA4P41247 253 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TXKP42681 527 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 LHX1P48742 406 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 DPYDQ12882 1025 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 OVGP1Q12889 678 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 EIF4HQ15056 248 aaKnown RBP6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ENOX2Q16206 610 aaKnown RBP6.07□□□□□ -1.44
ATXN3-245ENST00000556958 SV2CQ496J9 727 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 HECTD3Q5T447 861 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 C1QL3Q5VWW1 255 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 B4GALNT3Q6L9W6 998 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 SERPINA13PQ6UXR4 307 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TPGS1Q6ZTW0 290 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 HTR3DQ70Z44 454 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TMC6Q7Z403 805 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 CATSPER3Q86XQ3 398 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 CACUL1Q86Y37 369 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ANKMY2Q8IV38 441 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TMEM86AQ8N2M4 240 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 GALNT11Q8NCW6 608 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 PDZD8Q8NEN9 1154 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 OR4C6Q8NH72 309 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 WDR48Q8TAF3 677 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 C9orf43Q8TAL5 461 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ERMNQ8TAM6 284 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 GANCQ8TET4 914 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 GOLGA1Q92805 767 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ATXN7L3BQ96GX2 97 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ORAI3Q9BRQ5 295 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TTLL2Q9BWV7 592 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 NACA2Q9H009 215 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 RUBCNLQ9H714 662 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 C17orf75Q9HAS0 396 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 DDX43Q9NXZ2 648 aaKnown RBP6.07□□□□□ -1.44
ATXN3-245ENST00000556958 DONSONQ9NYP3 566 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ARHGAP28Q9P2N2 729 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 FBXO10Q9UK96 956 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 ACSL6Q9UKU0 697 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 SCML1Q9UN30 329 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 KIAA1024Q9UPX6 916 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 PCDHGA11Q9Y5H2 935 aa6.07□□□□□ -1.44
ATXN3-245ENST00000556958 TNRC6BQ9UPQ9 1833 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 OTOGQ6ZRI0 2925 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 PTPRJQ12913 1337 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 SPG11Q96JI7 2443 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 CCDC187A0A096LP49 1063 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 WIPF3A6NGB9 483 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TMX2-CTNND1H3BSU7 103 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 MTSS1O43312 755 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 OIP5O43482 229 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NOBOXO60393 691 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TCEA3O75764 348 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 IGHV4-34P06331 123 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ADRB2P07550 413 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 KRT7P08729 469 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 XBP1P17861 261 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 MUTP22033 750 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 SMTNP53814 917 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 POLE2P56282 527 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NOP14P78316 857 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 RELBQ01201 579 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 PDE4CQ08493 712 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 SSRP1Q08945 709 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 GOLGA8FQ08AF8 430 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 GOLGA8DPQ0D2H9 430 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 KLRB1Q12918 225 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TAF10Q12962 218 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 EIF3IQ13347 325 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 CAMK2GQ13555 558 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF234Q14588 700 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TMEM132DQ14C87 1099 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 NECTIN1Q15223 517 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TGIF1Q15583 401 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 CALCRLQ16602 461 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 DCAF6Q58WW2 860 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 JADE1Q6IE81 842 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 CAPRIN2Q6IMN6 1127 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 RBM44Q6ZP01 1051 aaKnown RBP6.06□□□□□ -1.44
ATXN3-245ENST00000556958 USP30Q70CQ3 517 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 DSG4Q86SJ6 1040 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 IQCHQ86VS3 1027 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 JAMLQ86YT9 394 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 TMEM130Q8N3G9 435 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 MFSD2AQ8NA29 543 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 STK32AQ8WU08 396 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 OVCA2Q8WZ82 227 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 SERAC1Q96JX3 654 aa6.06□□□□□ -1.44
ATXN3-245ENST00000556958 ZNF560Q96MR9 790 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms