RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 SLC9A9Q8IVB4 645 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 FAM217AQ8IXS0 508 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 GRAMD1CQ8IYS0 662 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 KIAA0895Q8NCT3 520 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 TMC2Q8TDI7 906 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC39A7Q92504 469 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 NXPE2Q96DL1 559 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 BACH2Q9BYV9 841 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 CYP3A43Q9HB55 503 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 APOBEC3GQ9HC16 384 aaKnown RBP9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 PRSS16Q9NQE7 514 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 KALRNO60229 2985 aa9.44□□□□□ -0.9
HNRNPC-227ENST00000556897 A0A1B0GTQ1 180 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 FAM47DPA6NHR8 397 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 E9PAM4 449 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 CUTAO60888 179 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 DNTTP04053 509 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 IGHV4-34P06331 123 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 C7P10643 843 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 GCLMP48507 274 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 C21orf59P57076 290 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 YWHAGP61981 247 aaKnown RBP eCLIP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ZBTB16Q05516 673 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 C6orf118Q5T5N4 469 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 CHST9Q7L1S5 443 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ADIPOR2Q86V24 386 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ZC3H3Q8IXZ2 948 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ARHGAP18Q8N392 663 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 NDRG1Q92597 394 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 PLD4Q96BZ4 506 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC6A18Q96N87 628 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ACE2Q9BYF1 805 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 IMPG2Q9BZV3 1241 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 NIF3L1Q9GZT8 377 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 KCTD10Q9H3F6 313 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 PRORYQ9H606 182 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 SGK2Q9HBY8 427 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 ABCB8Q9NUT2 735 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 PCDHGA1Q9Y5H4 931 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 RAI2Q9Y5P3 530 aa9.43□□□□□ -0.9
HNRNPC-227ENST00000556897 TK2O00142 265 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 ENC1O14682 589 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 VILLO15195 856 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 PAPSS1O43252 624 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TLX3O43711 291 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 KLRC4O43908 158 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 DFNA5O60443 496 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 DLDP09622 509 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TRIM49P0CI25 452 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TRIM49CP0CI26 452 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 PABPC1P11940 636 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 HNF1BP35680 557 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 EIF2S3P41091 472 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 HARS2P49590 506 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 VAMP7P51809 220 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TKTL1P51854 596 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 RACK1P63244 317 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 PPP3CAQ08209 521 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TARDBPQ13148 414 aaKnown RBP eCLIP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 DNAJC3Q13217 504 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TRIP4Q15650 581 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 RAB41Q5JT25 222 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 MBLAC2Q68D91 279 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF776Q68DI1 518 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 KIAA0895LQ68EN5 471 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 FMNL3Q8IVF7 1028 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 AHI1Q8N157 1196 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 GANCQ8TET4 914 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 WFIKKN2Q8TEU8 576 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 TMA16Q96EY4 203 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 CNDP2Q96KP4 475 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 ELF4Q99607 663 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 MTG2Q9H4K7 406 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 MMRN2Q9H8L6 949 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 FBRSQ9HAH7 460 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 SFMBT1Q9UHJ3 866 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 GGA2Q9UJY4 613 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 FRMD4BQ9Y2L6 1034 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 AK5Q9Y6K8 562 aa9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 MUC22E2RYF6 1773 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-227ENST00000556897 A0A1W2PPC4 97 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 PDXKO00764 312 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 RFPL3O75679 317 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 YEATS4O95619 227 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 ZBED1O96006 694 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 WNT1P04628 370 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 ATP5BP06576 529 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 ITGAVP06756 1048 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 PDIA4P13667 645 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 PLA2G2AP14555 144 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms