RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 SLC30A5Q8TAD4 765 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 HMGB4Q8WW32 186 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 GAB3Q8WWW8 586 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 SORCS1Q8WY21 1168 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 TMA16Q96EY4 203 aaKnown RBP10.77□□□□□ -0.69
SNX6-208ENST00000556712 NAP1L5Q96NT1 182 aaPredicted RBP10.77□□□□□ -0.69
SNX6-208ENST00000556712 PCDHB18PQ96TA0 734 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 C11orf70Q9BRQ4 267 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 RTN4Q9NQC3 1192 aaKnown RBP10.77□□□□□ -0.69
SNX6-208ENST00000556712 STIM2Q9P246 746 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 NCDNQ9UBB6 729 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 SLC27A6Q9Y2P4 619 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 PLXND1Q9Y4D7 1925 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 SPAG17Q6Q759 2223 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 CKAP5Q14008 2032 aa10.77□□□□□ -0.69
SNX6-208ENST00000556712 GPR179Q6PRD1 2367 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 GJB6O95452 261 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 GLI1P08151 1106 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 PTMSP20962 102 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 BCKDHBP21953 392 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 NTSR1P30989 418 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 CD70P32970 193 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 FLT3P36888 993 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 IL12RB1P42701 662 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 GABRB2P47870 512 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 NUMBP49757 651 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 SULT1E1P49888 294 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 ATXN1P54253 815 aaKnown RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 CDK17Q00537 523 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 EIF4EBP2Q13542 120 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 MS4A13Q5J8X5 152 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 E4F1Q66K89 784 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 KIAA1211LQ6NV74 962 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 NUDT18Q6ZVK8 323 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 TRMT11Q7Z4G4 463 aaKnown RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 KBTBD6Q86V97 674 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 RASSF3Q86WH2 238 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 ZNF677Q86XU0 584 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 LGI2Q8N0V4 545 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 CARNMT1Q8N4J0 409 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 EMC1Q8N766 993 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 HJURPQ8NCD3 748 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 ZNF397Q8NF99 534 aaPredicted RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 BAP1Q92560 729 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 RUBCNQ92622 972 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 C18orf8Q96DM3 657 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 TBCBQ99426 244 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 CIPCQ9C0C6 399 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 SLC6A17Q9H1V8 727 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 ABCB8Q9NUT2 735 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 SEPT11Q9NVA2 429 aaKnown RBP10.76□□□□□ -0.69
SNX6-208ENST00000556712 BCCIPQ9P287 314 aaKnown RBP eCLIP10.76□□□□□ -0.69
SNX6-208ENST00000556712 GGA2Q9UJY4 613 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 RAB23Q9ULC3 237 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 STARD13Q9Y3M8 1113 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 DAAM1Q9Y4D1 1078 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 OTOGLQ3ZCN5 2332 aa10.76□□□□□ -0.69
SNX6-208ENST00000556712 TNRC6BQ9UPQ9 1833 aaKnown RBP10.75□□□□□ -0.69
SNX6-208ENST00000556712 CCDC163A0A0D9SF12 145 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 A0A1B0GTH6 734 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 A0A1W2PQF6 199 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 LRRC53A6NM62 1247 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 M0QYT0 321 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 SERPINC1P01008 464 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 GABRG2P18507 467 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 TACR2P21452 398 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 NOS2P35228 1153 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 MATKP42679 507 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 IRAK1P51617 712 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 SNX16P57768 344 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 ZNF445P59923 1031 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 CENPCQ03188 943 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 FUT11Q495W5 492 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 HSF5Q4G112 596 aaPredicted RBP10.75□□□□□ -0.69
SNX6-208ENST00000556712 FILIP1LQ4L180 1135 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 RNF43Q68DV7 783 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 LAIR1Q6GTX8 287 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 CHST9Q7L1S5 443 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 ZDHHC17Q8IUH5 632 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 MFN1Q8IWA4 741 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 KIAA2013Q8IYS2 634 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 PGBD3Q8N328 593 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 FRMD1Q8N878 549 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 ZNF366Q8N895 744 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 OLIG1Q8TAK6 271 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 CYB5D2Q8WUJ1 264 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 RLN3Q8WXF3 142 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 RNF34Q969K3 372 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 NPY6RQ99463 290 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 GABRG3Q99928 467 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 CD248Q9HCU0 757 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 POLMQ9NP87 494 aaPredicted RBP10.75□□□□□ -0.69
SNX6-208ENST00000556712 PARD6AQ9NPB6 346 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 CD93Q9NPY3 652 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 ANLNQ9NQW6 1124 aa10.75□□□□□ -0.69
SNX6-208ENST00000556712 TMPRSS4Q9NRS4 437 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms