RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SUSD2Q9UGT4 822 aa23.53■■□□□ 1.36
ACTN1-220ENST00000556433 GOLGA6L7A0A1B0GV03 622 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 KCNJ18B7U540 433 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 OPHN1O60890 802 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 IGLV3-27P01718 113 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 ACADMP11310 421 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 KRT5P13647 590 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 HLA-EP13747 358 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 GNSP15586 552 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 SGSHP51688 502 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 COPAP53621 1224 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 MARSP56192 900 aaKnown RBP23.52■■□□□ 1.36
ACTN1-220ENST00000556433 SEMA3BQ13214 749 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 FNDC3BQ53EP0 1204 aaKnown RBP23.52■■□□□ 1.36
ACTN1-220ENST00000556433 NUGGCQ68CJ6 796 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 RFWD3Q6PCD5 774 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 MINDY1Q8N5J2 469 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 OR2I1PQ8NGU4 316 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 CYB5D2Q8WUJ1 264 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 GGA2Q9UJY4 613 aa23.52■■□□□ 1.36
ACTN1-220ENST00000556433 MEI4A8MW99 385 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 ACSL4O60488 711 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 TBL1XO60907 577 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 FGFR1OPO95684 399 aaKnown RBP23.51■■□□□ 1.35
ACTN1-220ENST00000556433 PIK3R6Q5UE93 754 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 PIP4P1Q86T03 277 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 ADIPOR2Q86V24 386 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 CACUL1Q86Y37 369 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 SCUBE3Q8IX30 993 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.51■■□□□ 1.35
ACTN1-220ENST00000556433 IRX2Q9BZI1 471 aaPredicted RBP23.51■■□□□ 1.35
ACTN1-220ENST00000556433 UBE2TQ9NPD8 197 aaPredicted RBP23.51■■□□□ 1.35
ACTN1-220ENST00000556433 ST7Q9NRC1 585 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 CNTN6Q9UQ52 1028 aa23.51■■□□□ 1.35
ACTN1-220ENST00000556433 UPK3BL1B0FP48 263 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 UPK3BL2E5RIL1 263 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 PABPC1P11940 636 aaKnown RBP23.5■■□□□ 1.35
ACTN1-220ENST00000556433 GPD2P43304 727 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 RING1Q06587 406 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 FAM133BQ5BKY9 247 aaKnown RBP23.5■■□□□ 1.35
ACTN1-220ENST00000556433 MPP7Q5T2T1 576 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 KIAA0907Q7Z7F0 614 aaPredicted RBP23.5■■□□□ 1.35
ACTN1-220ENST00000556433 AHI1Q8N157 1196 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 CADM4Q8NFZ8 388 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 OR2T3Q8NH03 318 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 DNASE2BQ8WZ79 361 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 AZIN2Q96A70 460 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 NUP58Q9BVL2 599 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 TMEM245Q9H330 911 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 PCNX2A6NKB5 2137 aa23.5■■□□□ 1.35
ACTN1-220ENST00000556433 IRAK2O43187 625 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 IGLV3-19P01714 112 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 FYNP06241 537 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 SLC6A4P31645 630 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 RPL34P49207 117 aaKnown RBP23.49■■□□□ 1.35
ACTN1-220ENST00000556433 CAMK2GQ13555 558 aaPredicted RBP23.49■■□□□ 1.35
ACTN1-220ENST00000556433 MBLAC2Q68D91 279 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 DENND1BQ6P3S1 775 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 CREBRFQ8IUR6 639 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 ZNF366Q8N895 744 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 DDX50Q9BQ39 737 aaKnown RBP23.49■■□□□ 1.35
ACTN1-220ENST00000556433 MIR1-1HGQ9H1L0 117 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 STIM2Q9P246 746 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 NAALADL1Q9UQQ1 740 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 ADAMTS9Q9P2N4 1935 aa23.49■■□□□ 1.35
ACTN1-220ENST00000556433 SPAARA0A1B0GVQ0 90 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 METTL12A8MUP2 240 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 SART1O43290 800 aaKnown RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 LETM1O95202 739 aaPredicted RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 TOP3BO95985 862 aaKnown RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 ATP5BP06576 529 aaKnown RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 SPINK2P20155 84 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 CD70P32970 193 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 ACADSBP45954 432 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 PTPRNQ16849 979 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 DCAF12L1Q5VU92 463 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 FAM124AQ86V42 546 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 WFDC5Q8TCV5 224 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 DQX1Q8TE96 717 aaKnown RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 FAM149B1Q96BN6 582 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 FCRL2Q96LA5 508 aaPredicted RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 DNAAF2Q9NVR5 837 aaKnown RBP23.48■■□□□ 1.35
ACTN1-220ENST00000556433 WASF3Q9UPY6 502 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 NFE2L3Q9Y4A8 694 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 CACNA1EQ15878 2313 aa23.48■■□□□ 1.35
ACTN1-220ENST00000556433 A0A1B0GTW7 788 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 MED7O43513 233 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 DLDP09622 509 aaKnown RBP23.47■■□□□ 1.35
ACTN1-220ENST00000556433 POLR2EP19388 210 aaKnown RBP23.47■■□□□ 1.35
ACTN1-220ENST00000556433 SIM1P81133 766 aaPredicted RBP23.47■■□□□ 1.35
ACTN1-220ENST00000556433 NADSYN1Q6IA69 706 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 ZNF557Q8N988 423 aaPredicted RBP23.47■■□□□ 1.35
ACTN1-220ENST00000556433 STK32AQ8WU08 396 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 ZNF606Q8WXB4 792 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 SERPINB11Q96P15 392 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 CRACR2AQ9BSW2 395 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 SLC4A5Q9BY07 1137 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 LHX5Q9H2C1 402 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 TLR6Q9Y2C9 796 aa23.47■■□□□ 1.35
ACTN1-220ENST00000556433 CAPN9O14815 690 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms