RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SERPINB11Q96P15 392 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 NPY6RQ99463 290 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 P2RY13Q9BPV8 354 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 NUCKS1Q9H1E3 243 aaKnown RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 KCNH6Q9H252 994 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 CHRDQ9H2X0 955 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 RBM12Q9NTZ6 932 aaKnown RBP10.04□□□□□ -0.8
SRP54-210ENST00000556380 TAS2R14Q9NYV8 317 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 WDR35Q9P2L0 1181 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 RAPGEFL1Q9UHV5 662 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 TLR6Q9Y2C9 796 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 DMDP11532 3685 aa10.04□□□□□ -0.8
SRP54-210ENST00000556380 ANTXRLA6NF34 631 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 K7EQS6 105 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 CAPN9O14815 690 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TRIM24O15164 1050 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 CACNG3O60359 315 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 ACSL4O60488 711 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TULP3O75386 442 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 ENDOD1O94919 500 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TPM3P06753 285 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 GZMAP12544 262 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TYRP14679 529 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TFE3P19532 575 aaPredicted RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 DRD1P21728 446 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 CHKAP35790 457 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 FLT3P36888 993 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 KLHL30Q0D2K2 578 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 GRSF1Q12849 480 aaKnown RBP eCLIP10.03□□□□□ -0.8
SRP54-210ENST00000556380 TCF15Q12870 199 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TBX2Q13207 712 aaPredicted RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 FAM133BQ5BKY9 247 aaKnown RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 ZC3H12AQ5D1E8 599 aaKnown RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 ADGRF1Q5T601 910 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 NUGGCQ68CJ6 796 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 SPECC1LQ69YQ0 1117 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 TPGS1Q6ZTW0 290 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 SFTPA1Q8IWL2 248 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 UNC45BQ8IWX7 931 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 MSANTD4Q8NCY6 345 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 CPLX3Q8WVH0 158 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 MYEOVQ96EZ4 313 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 PGAP3Q96FM1 320 aaPredicted RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 C11orf70Q9BRQ4 267 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 RRN3Q9NYV6 651 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.03□□□□□ -0.81e-7■□□□□ 8.7
SRP54-210ENST00000556380 ADAM22Q9P0K1 906 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 LUC7L2Q9Y383 392 aaKnown RBP10.03□□□□□ -0.8
SRP54-210ENST00000556380 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.89e-6■■■□□ 16.5
SRP54-210ENST00000556380 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
SRP54-210ENST00000556380 GOLGA6L7A0A1B0GV03 622 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 C2CD4BA6NLJ0 364 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 GOLGA8SH3BPF8 625 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 I6L893 689 aaPredicted RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 GJB6O95452 261 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 CALB1P05937 261 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 SLC6A4P31645 630 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 CASP14P31944 242 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 GRIA2P42262 883 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 NSFP46459 744 aaKnown RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 CXCR3P49682 368 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 RNASE9P60153 205 aaKnown RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 MTAPQ13126 283 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 LRRC32Q14392 662 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PPP2R5DQ14738 602 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 ANO4Q32M45 955 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 SLC25A52Q3SY17 297 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 ARTNQ5T4W7 220 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 PIK3R6Q5UE93 754 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PKN3Q6P5Z2 889 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 WDR59Q6PJI9 974 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 Q6ZS52 159 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PHLDB2Q86SQ0 1253 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 C1orf210Q8IVY1 113 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 DRC7Q8IY82 874 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 MCOLN2Q8IZK6 566 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 NAT16Q8N8M0 369 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 JOSD2Q8TAC2 188 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 CENPIQ92674 756 aaPredicted RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 VCPIP1Q96JH7 1222 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PNKPQ96T60 521 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 DNAJC7Q99615 494 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PRMT1Q99873 361 aaKnown RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 IER2Q9BTL4 223 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 ANP32EQ9BTT0 268 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 BBS2Q9BXC9 721 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 ISCUQ9H1K1 167 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 ANLNQ9NQW6 1124 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 PIGVQ9NUD9 493 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
SRP54-210ENST00000556380 C2orf42Q9NWW7 574 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 DEC1Q9P2X7 70 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 XPO7Q9UIA9 1087 aaKnown RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 HCN2Q9UL51 889 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 CLEC4EQ9ULY5 219 aa10.02□□□□□ -0.81
SRP54-210ENST00000556380 BZW2Q9Y6E2 419 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms