RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
SLIRP-206ENST00000556375 RAB23Q9ULC3 237 aa11.97□□□□□ -0.49
SLIRP-206ENST00000556375 CLEC4EQ9ULY5 219 aa11.97□□□□□ -0.49
SLIRP-206ENST00000556375 MYO6Q9UM54 1294 aa11.97□□□□□ -0.49
SLIRP-206ENST00000556375 TYW5A2RUC4 315 aaKnown RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 NPC1O15118 1278 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 RPP40O75818 363 aaKnown RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 ALDH1A2O94788 518 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 SERPINC1P01008 464 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 HOXB2P14652 356 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 HNRNPLP14866 589 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 MMP8P22894 467 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 CCR1P32246 355 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 GBP1P32455 592 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 MATKP42679 507 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 SGSHP51688 502 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 MTA1Q13330 715 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 E2F5Q15329 346 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 OTUD1Q5VV17 481 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 LAIR1Q6GTX8 287 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 ANO7Q6IWH7 933 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 PRR23BQ6ZRT6 265 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 LUZP1Q86V48 1076 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 CHSY1Q86X52 802 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 CHPFQ8IZ52 775 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 MDGA1Q8NFP4 955 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 UCMAQ8WVF2 138 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 CPA5Q8WXQ8 436 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 RUBCNQ92622 972 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 GABRG3Q99928 467 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 POLMQ9NP87 494 aaPredicted RBP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
SLIRP-206ENST00000556375 STAP1Q9ULZ2 295 aa11.96□□□□□ -0.49
SLIRP-206ENST00000556375 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 SYNJ2BP-COX16A0A087WUM0 186 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 GOLGA6L7A0A1B0GV03 622 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 KCNU1A8MYU2 1149 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 TBL1XO60907 577 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 CCDC172P0C7W6 258 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 FERP16591 822 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 ABCB4P21439 1286 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 HLA-FP30511 346 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 CENPCQ03188 943 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 ARID5AQ03989 594 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 C2CD6Q53TS8 623 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 MS4A13Q5J8X5 152 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 SDE2Q6IQ49 451 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 CEP68Q76N32 757 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 ARCQ7LC44 396 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 BAP1Q92560 729 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 NT5C3BQ969T7 300 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 NAP1L5Q96NT1 182 aaPredicted RBP11.95□□□□□ -0.5
SLIRP-206ENST00000556375 ACOX2Q99424 681 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 NPY6RQ99463 290 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 HINFPQ9BQA5 517 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 TMEM51Q9NW97 253 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 ELOVL2Q9NXB9 296 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 CACNA2D2Q9NY47 1150 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 COX16Q9P0S2 106 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 NCDNQ9UBB6 729 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
SLIRP-206ENST00000556375 GMEB2Q9UKD1 530 aa11.95□□□□□ -0.5
SLIRP-206ENST00000556375 NYNRINQ9P2P1 1898 aaKnown RBP11.95□□□□□ -0.5
SLIRP-206ENST00000556375 SPTBN4Q9H254 2564 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 A0A1W2PQF6 199 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 FAM170AA1A519 330 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 F5H5T6 163 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 GOLGA8SH3BPF8 625 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 M0QYT0 321 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 PABPC1P11940 636 aaKnown RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 UNGP13051 313 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 TACR2P21452 398 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 FLT3P36888 993 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 WASP42768 502 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 NSFP46459 744 aaKnown RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 SULT1E1P49888 294 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 RPS24P62847 133 aaKnown RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 FANCCQ00597 558 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 NME3Q13232 169 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 ENPP2Q13822 863 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 CLEC16AQ2KHT3 1053 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 SLC25A52Q3SY17 297 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 BRMS1LQ5PSV4 323 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 RAP1GAP2Q684P5 730 aa11.94□□□□□ -0.5
SLIRP-206ENST00000556375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 KIAA0907Q7Z7F0 614 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-206ENST00000556375 MFN1Q8IWA4 741 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms