RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ANKRD62A6NC57 917 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZSCAN5CA6NGD5 496 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF233A6NK53 670 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FAM90A27PA6NNH2 459 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ANKRD65E5RJM6 399 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PODXLO00592 558 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CLIC2O15247 247 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 TTI1O43156 1089 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 DAPK3O43293 454 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SPOPO43791 374 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PHF2O75151 1096 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 AKAP3O75969 853 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FGGP02679 453 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 AMY2AP04746 511 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 C6orf222P0C671 652 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FAM153BP0C7A2 387 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 POLR2MP0CAP2 368 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZBTB48P10074 688 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 EEF2P13639 858 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 EZRP15311 586 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SLC9A1P19634 815 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 AMY2BP19961 511 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CHRNA3P32297 505 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 NF2P35240 595 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FMO5P49326 533 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PDE6CP51160 858 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CYP2J2P51589 502 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CASP5P51878 434 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 STAT2P52630 851 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PMS2P54278 862 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 GALCP54803 685 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 JAM2P57087 298 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PTENP60484 403 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FKBP1AP62942 108 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CYP4A11Q02928 519 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF844Q08AG5 666 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 BFSP1Q12934 665 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ITGB3BPQ13352 177 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 MYBPC2Q14324 1141 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SLMAPQ14BN4 828 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 EPHA7Q15375 998 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PPP1R7Q15435 360 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SNCBQ16143 134 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PTPROQ16827 1216 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FAM153CQ494X1 144 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ODR4Q5SWX8 454 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 AGBL4Q5VU57 503 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 TMEM200BQ69YZ2 307 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 USP17L6PQ6QN14 398 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 Q6ZSN1 163 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 USP30Q70CQ3 517 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 INTS8Q75QN2 995 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 EPM2AIP1Q7L775 607 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ADGRE4PQ86SQ3 457 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 NT5DC3Q86UY8 548 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CATSPER3Q86XQ3 398 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 RBM12BQ8IXT5 1001 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 TDHQ8IZJ6 230 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FUKQ8N0W3 1084 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 IQCKQ8N0W5 287 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 RASGEF1CQ8N431 466 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 METTL13Q8N6R0 699 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 LRRC57Q8N9N7 239 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 PRPF38AQ8NAV1 312 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 GRK7Q8WTQ7 553 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SCFD2Q8WU76 684 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 KIFAP3Q92845 792 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CYFIP2Q96F07 1278 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CCT8L2Q96SF2 557 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ADOQ96SZ5 270 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 MYCBPQ99417 103 aaPredicted RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CDC6Q99741 560 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF577Q9BSK1 485 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 DHRS4Q9BTZ2 278 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 TIPINQ9BVW5 301 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FGFBP2Q9BYJ0 223 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 STK33Q9BYT3 514 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 TRIM31Q9BZY9 425 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 DBNDD1Q9H9R9 158 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 HOMER3Q9NSC5 361 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 RIC8BQ9NVN3 520 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 CTTNBP2NLQ9P2B4 639 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 LARSQ9P2J5 1176 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 FAM153AQ9UHL3 310 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 DNAJC12Q9UKB3 198 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 SCAF8Q9UPN6 1271 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 EXOC7Q9UPT5 735 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ATP8A1Q9Y2Q0 1164 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 VWA7Q9Y334 891 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 MRPL11Q9Y3B7 192 aaKnown RBP4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ASB1Q9Y576 335 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 MUC6Q6W4X9 2439 aa4.66□□□□□ -1.66
ATXN3-241ENST00000556374 ZMYM2Q9UBW7 1377 aa4.65□□□□□ -1.66
ATXN3-241ENST00000556374 LTBP2Q14767 1821 aa4.65□□□□□ -1.66
ATXN3-241ENST00000556374 TMEM110-MUSTN1A8MSY1 372 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 F5H6K3 240 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 ZNF561-AS1K7EIQ3 104 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 MAN2B1O00754 1011 aa4.65□□□□□ -1.67
ATXN3-241ENST00000556374 NDC80O14777 642 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms