RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TCEAL4Q96EI5 215 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 FAM161BQ96MY7 647 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 RNF157Q96PX1 679 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 KCTD15Q96SI1 283 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CYP2S1Q96SQ9 504 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 RNF38Q9H0F5 515 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 RRAGDQ9NQL2 400 aaPredicted RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TDP1Q9NUW8 608 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 KLHL11Q9NVR0 708 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 GPATCH2LQ9NWQ4 482 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 THG1LQ9NWX6 298 aaKnown RBP9.53□□□□□ -0.88
ACTN1-218ENST00000556343 SMPD4Q9NXE4 827 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 CALCOCO1Q9P1Z2 691 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 RAD54BQ9Y620 910 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 MYO7AQ13402 2215 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 GBF1Q92538 1859 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 MYO9BQ13459 2157 aa9.53□□□□□ -0.88
ACTN1-218ENST00000556343 TNRC18O15417 2968 aaPredicted RBP9.52□□□□□ -0.88
ACTN1-218ENST00000556343 CHD9Q3L8U1 2897 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 LEFTY2O00292 366 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF185O15231 689 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CST8O60676 142 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 MOSPD3O75425 235 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 GLP2RO95838 553 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CYBBP04839 570 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 TCF3P15923 654 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 TACR2P21452 398 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 TGM2P21980 687 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 EPHB2P29323 1055 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CCR2P41597 374 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 NR2C2P49116 596 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 KCNQ1P51787 676 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 NTHL1P78549 312 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 RBM10P98175 930 aaKnown RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 AUHQ13825 339 aaKnown RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 SKIV2LQ15477 1246 aaKnown RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 TAZQ16635 292 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 RAB6CQ53S08 254 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 ADGRF1Q5T601 910 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 TTC39BQ5VTQ0 682 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 DCAF12L1Q5VU92 463 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 RFX8Q6ZV50 586 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 BBS12Q6ZW61 710 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CYP4V2Q6ZWL3 525 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 HTR3DQ70Z44 454 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CHSY1Q86X52 802 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 DENND1CQ8IV53 801 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CCDC26Q8TAB7 109 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 P3H4Q92791 437 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 ACSF2Q96CM8 615 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 HAUS1Q96CS2 278 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 FAF2Q96CS3 445 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 OTUB2Q96DC9 234 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 MS4A14Q96JA4 679 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 RPRD1AQ96P16 312 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CSPG4P5Q96PW8 444 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 APOL5Q9BWW9 433 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 HEMGNQ9BXL5 484 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 ADAM33Q9BZ11 813 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 ZYG11BQ9C0D3 744 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 RAB6CQ9H0N0 254 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 L2HGDHQ9H9P8 463 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 GKN1Q9NS71 199 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 OBP2AQ9NY56 170 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CLEC1BQ9P126 229 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CFAP97Q9P2B7 532 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 PPARGC1AQ9UBK2 798 aaKnown RBP9.52□□□□□ -0.89
ACTN1-218ENST00000556343 CD207Q9UJ71 328 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 HS3ST4Q9Y661 456 aa9.52□□□□□ -0.89
ACTN1-218ENST00000556343 MTCL1Q9Y4B5 1905 aaKnown RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 C3orf70A6NLC5 250 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 E9PAM4 449 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 APOC4-APOC2K7ER74 178 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 SOX1O00570 391 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 NCAM2O15394 837 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 LINC01565O15544 149 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 LRIG2O94898 1065 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 APOC2P02655 101 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 FOSL2P15408 326 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 RHOQP17081 205 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 GOT1P17174 413 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 CEBPBP17676 345 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 MX2P20592 715 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 ADGRE1Q14246 886 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 CA9Q16790 459 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 SLC5A9Q2M3M2 681 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 MS4A13Q5J8X5 152 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 RAP1GAP2Q684P5 730 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 TMCO3Q6UWJ1 677 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 GET4Q7L5D6 327 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 OTOP3Q7RTS5 596 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF572Q7Z3I7 529 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 ARID3BQ8IVW6 561 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 LGI2Q8N0V4 545 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 PYROXD2Q8N2H3 581 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF557Q8N988 423 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-218ENST00000556343 TTC16Q8NEE8 873 aa9.51□□□□□ -0.89
ACTN1-218ENST00000556343 ITFG1Q8TB96 612 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms