RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 MAEAQ7L5Y9 396 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 SYT13Q7L8C5 426 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 DNAJB7Q7Z6W7 309 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 NEK8Q86SG6 692 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 TMC8Q8IU68 726 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 SCUBE1Q8IWY4 988 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 MCPH1Q8NEM0 835 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 CCDC26Q8TAB7 109 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 EIF2AK1Q9BQI3 630 aaKnown RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 MCMBPQ9BTE3 642 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 TASP1Q9H6P5 420 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 TOPORSQ9NS56 1045 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 GKN1Q9NS71 199 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 TNFRSF10DQ9UBN6 386 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-239ENST00000556315 KLK13Q9UKR3 277 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 PCDHA12Q9UN75 941 aa5.25□□□□□ -1.57
ATXN3-239ENST00000556315 A0A087WWV3 80 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 TRBV23-1A0A0A0MS06 115 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 SPAARA0A1B0GVQ0 90 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 TLDC2A0PJX2 215 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ABLIM1O14639 778 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PRODHO43272 600 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 USO1O60763 962 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 EGFP01133 1207 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PABPC1P11940 636 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 KCNE1P15382 129 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PAMP19021 973 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PDIA3P30101 505 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ECI1P42126 302 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 GRIA2P42262 883 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 DPP6P42658 865 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 MCM2P49736 904 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 AFF3P51826 1226 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 DGKEP52429 567 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 EFNA5P52803 228 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 EVCP57679 992 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 CCT2P78371 535 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 SCAPQ12770 1279 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 SEMA3BQ13214 749 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 GPR17Q13304 367 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 HNRNPDQ14103 355 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 DMC1Q14565 340 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 NPY5RQ15761 445 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 COL28A1Q2UY09 1125 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 GPR158Q5T848 1215 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 NT5DC1Q5TFE4 455 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ATF7IP2Q5U623 682 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 HLA-DQA1Q5Y7H0 255 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PMS2CLQ68D20 193 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 CENPPQ6IPU0 288 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 BLOC1S2Q6QNY1 142 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 GAREM2Q75VX8 874 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PIP4P1Q86T03 277 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ITIH5Q86UX2 942 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 TMEFF1Q8IYR6 380 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 CHCHD4Q8N4Q1 142 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 CXorf38Q8TB03 319 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 DEPTORQ8TB45 409 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PIGOQ8TEQ8 1089 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PIGKQ92643 395 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 PTCHD1Q96NR3 888 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ACAP3Q96P50 834 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 P2RY13Q9BPV8 354 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 CCDC94Q9BW85 323 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 NUSAP1Q9BXS6 441 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 AGXT2Q9BYV1 514 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 FBRSL1Q9HCM7 1045 aaKnown RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 POLR3BQ9NW08 1133 aaPredicted RBP5.24□□□□□ -1.57
ATXN3-239ENST00000556315 ERVK13-1Q9NX77 482 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 YIPF1Q9Y548 306 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 NID2Q14112 1375 aa5.24□□□□□ -1.57
ATXN3-239ENST00000556315 MIA3Q5JRA6 1907 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 OTOL1A6NHN0 477 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 OR6C75A6NL08 312 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PATE3B3GLJ2 98 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 K7ERI5 159 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CPLX1O14810 134 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 THBDP07204 575 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CPA1P15085 419 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CYP11B2P19099 503 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 GABRR2P28476 465 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CDC25CP30307 473 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 NAMPTP43490 491 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 DHPSP49366 369 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 TUFMP49411 452 aaKnown RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 CDR1P51861 262 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 ATXN3P54252 364 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 SUMO1P63165 101 aaKnown RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 YWHAHQ04917 246 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 MYBPC2Q14324 1141 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PPP2R5AQ15172 486 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 PDGFRLQ15198 375 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 HSF5Q4G112 596 aaPredicted RBP5.23□□□□□ -1.57
ATXN3-239ENST00000556315 TRIM61Q5EBN2 209 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 SPDYCQ5MJ68 293 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 STXBP5Q5T5C0 1151 aa5.23□□□□□ -1.57
ATXN3-239ENST00000556315 E4F1Q66K89 784 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms