RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.62■□□□□ 0.73
CDKN3-209ENST00000556102 OR2T3Q8NH03 318 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 SLC35F5Q8WV83 523 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 IRGQQ8WZA9 623 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 TFAP2BQ92481 460 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 CEP63Q96MT8 703 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 TIGD1Q96MW7 591 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 MIR1-1HGQ9H1L0 117 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 MSRB2Q9Y3D2 182 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 PCDHB4Q9Y5E5 795 aa19.62■□□□□ 0.73
CDKN3-209ENST00000556102 ASPMQ8IZT6 3477 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 SH3BP5O60239 455 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 HLA-EP13747 358 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 RGS7P49802 495 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 STILQ15468 1287 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 CNGA2Q16280 664 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 ZNF423Q2M1K9 1284 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 FNDC3BQ53EP0 1204 aaKnown RBP19.61■□□□□ 0.73
CDKN3-209ENST00000556102 CHST9Q7L1S5 443 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 KIAA0907Q7Z7F0 614 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-209ENST00000556102 AHI1Q8N157 1196 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 DHTKD1Q96HY7 919 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-209ENST00000556102 IRX2Q9BZI1 471 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-209ENST00000556102 PCED1AQ9H1Q7 454 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 TMEM245Q9H330 911 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 ABCB8Q9NUT2 735 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 GGA2Q9UJY4 613 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 KLK13Q9UKR3 277 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.61■□□□□ 0.73
CDKN3-209ENST00000556102 PLA2G4CQ9UP65 541 aa19.61■□□□□ 0.73
CDKN3-209ENST00000556102 KNL1Q8NG31 2342 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 M0QYV0 167 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 GABBR2O75899 941 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 IGLV3-27P01718 113 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 PABPC1P11940 636 aaKnown RBP19.6■□□□□ 0.73
CDKN3-209ENST00000556102 PPP1R2P41236 205 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 CCDC40Q4G0X9 1142 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 PMF1Q6P1K2 205 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 ADIPOR2Q86V24 386 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 PPM1KQ8N3J5 372 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 CYB5D2Q8WUJ1 264 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 CAMK1GQ96NX5 476 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 LHX5Q9H2C1 402 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 FBRSQ9HAH7 460 aa19.6■□□□□ 0.73
CDKN3-209ENST00000556102 ZZEF1O43149 2961 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 RNF225M0QZC1 329 aaPredicted RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 BCAT2O15382 392 aaPredicted RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 P4HA2O15460 535 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 LTFP02788 710 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 C7P10643 843 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 BRD2P25440 801 aaKnown RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 SGSHP51688 502 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 RING1Q06587 406 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 CETN1Q12798 172 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 TRIP6Q15654 476 aaKnown RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 MPP7Q5T2T1 576 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 NUGGCQ68CJ6 796 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 FAM124AQ86V42 546 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 NAXDQ8IW45 347 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 UNC45BQ8IWX7 931 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 ZNF557Q8N988 423 aaPredicted RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 LMO3Q8TAP4 145 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 KAT5Q92993 513 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 HSFY1Q96LI6 401 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 ZSWIM1Q9BR11 485 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 EIF2B4Q9UI10 523 aaKnown RBP19.59■□□□□ 0.73
CDKN3-209ENST00000556102 PCDHB9Q9Y5E1 797 aa19.59■□□□□ 0.73
CDKN3-209ENST00000556102 CABIN1Q9Y6J0 2220 aa19.58■□□□□ 0.73
CDKN3-209ENST00000556102 PIK3R2O00459 728 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 FBXO21O94952 628 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 DLDP09622 509 aaKnown RBP19.58■□□□□ 0.72
CDKN3-209ENST00000556102 CD44P16070 742 aaKnown RBP19.58■□□□□ 0.72
CDKN3-209ENST00000556102 SLC11A2P49281 568 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 PTPRNQ16849 979 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 FAM133BQ5BKY9 247 aaKnown RBP19.58■□□□□ 0.72
CDKN3-209ENST00000556102 PIK3R6Q5UE93 754 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 MBLAC2Q68D91 279 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 ISM2Q6H9L7 571 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 RAB44Q7Z6P3 723 aaPredicted RBP19.58■□□□□ 0.72
CDKN3-209ENST00000556102 CHCHD4Q8N4Q1 142 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 ZNF366Q8N895 744 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 WFDC5Q8TCV5 224 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 ZCCHC14Q8WYQ9 949 aaKnown RBP19.58■□□□□ 0.72
CDKN3-209ENST00000556102 GOLGA1Q92805 767 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 AZIN2Q96A70 460 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 MAN1B1Q9UKM7 699 aa19.58■□□□□ 0.72
CDKN3-209ENST00000556102 FAM221BA6H8Z2 402 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 IRAK2O43187 625 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 ACSL4O60488 711 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 TBL1XO60907 577 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 CER1O95813 267 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 ATP5BP06576 529 aaKnown RBP19.57■□□□□ 0.72
CDKN3-209ENST00000556102 ZNF883P0CG24 379 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 SLC6A4P31645 630 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 CD70P32970 193 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 TBX4P57082 545 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 NUCB2P80303 420 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 ZBTB16Q05516 673 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 TTI2Q6NXR4 508 aa19.57■□□□□ 0.72
CDKN3-209ENST00000556102 RFWD3Q6PCD5 774 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms