RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.49□□□□□ -1.69
FOXN3-210ENST00000555658 FRMD4BQ9Y2L6 1034 aa4.49□□□□□ -1.69
FOXN3-210ENST00000555658 COL4A3BPQ9Y5P4 624 aa4.49□□□□□ -1.69
FOXN3-210ENST00000555658 HS3ST4Q9Y661 456 aa4.49□□□□□ -1.69
FOXN3-210ENST00000555658 IGKV6D-21A0A0A0MT36 114 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 BICDL2A1A5D9 508 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 FSD2A1L4K1 749 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 GAGE12HA6NDE8 117 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 IKBKBO14920 756 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 KPNA6O60684 536 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 DNAJC8O75937 253 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 AKR1A1P14550 325 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 HSPA6P17066 643 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 NR4A1P22736 598 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CASRP41180 1078 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CD151P48509 253 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CPT1AP50416 773 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 POLGP54098 1239 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 MYL5Q02045 173 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PRKCEQ02156 737 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PRKCZQ05513 592 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 MRPL49Q13405 166 aaKnown RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 GIT2Q14161 759 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ZRSR2Q15696 482 aaKnown RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CCL14Q16627 93 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 UGCGQ16739 394 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 TPD52L1Q16890 204 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 HSDL1Q3SXM5 330 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PRAMEF19Q5SWL8 479 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CCDC181Q5TID7 509 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 SYCE2Q6PIF2 218 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 C1orf186Q6ZWK4 172 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 GDF7Q7Z4P5 450 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CCDC60Q8IWA6 550 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 MYOCDQ8IZQ8 938 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 LILRB2Q8N423 598 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 MYCT1Q8N699 235 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 LSM14AQ8ND56 463 aaKnown RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 MCPH1Q8NEM0 835 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PPTC7Q8NI37 304 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 RAET1EQ8TD07 263 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 AFAP1L1Q8TED9 768 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ATP8B4Q8TF62 1192 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 AFG1LQ8WV93 481 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 KIFAP3Q92845 792 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CAVIN3Q969G5 261 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 DNAJC19Q96DA6 116 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ZNF764Q96H86 408 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 DHTKD1Q96HY7 919 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 DRC1Q96MC2 740 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 CLUHP3Q96NS8 147 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PAIP2Q9BPZ3 127 aaKnown RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 BPIFA3Q9BQP9 254 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 JPH2Q9BR39 696 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 REEP2Q9BRK0 252 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ARHGAP39Q9C0H5 1083 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 C17orf75Q9HAS0 396 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PARVGQ9HBI0 331 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ERAP1Q9NZ08 941 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 WRAP73Q9P2S5 460 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 SEL1LQ9UBV2 794 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ZNF215Q9UL58 517 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ODF2LQ9ULJ1 636 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 USP18Q9UMW8 372 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 Q9Y3F1 56 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 PHIPQ8WWQ0 1821 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 ATAD5Q96QE3 1844 aa4.48□□□□□ -1.69
FOXN3-210ENST00000555658 SYNRGQ9UMZ2 1314 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.47□□□□□ -1.69
FOXN3-210ENST00000555658 FRMD3A2A2Y4 597 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 GRID2IPA4D2P6 1211 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 CCDC169A6NNP5 214 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 H0YCG3 227 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 KLRC4O43908 158 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 ZEB2O60315 1214 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 HBP1O60381 514 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 USO1O60763 962 aaKnown RBP4.47□□□□□ -1.69
FOXN3-210ENST00000555658 DUSP11O75319 330 aaKnown RBP4.47□□□□□ -1.69
FOXN3-210ENST00000555658 FGFR1OPO95684 399 aaKnown RBP4.47□□□□□ -1.69
FOXN3-210ENST00000555658 CCDC172P0C7W6 258 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 RARBP10826 455 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 NEFHP12036 1026 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 MARK3P27448 753 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 CTGFP29279 349 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 APOBEC3AP31941 199 aaPredicted RBP4.47□□□□□ -1.69
FOXN3-210ENST00000555658 ABCD1P33897 745 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 PRCPP42785 496 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 GZMKP49863 264 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 ZNF131P52739 623 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 ARHGAP1Q07960 439 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 STK4Q13043 487 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 COASYQ13057 564 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 ALCAMQ13740 583 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 PPP2R5AQ15172 486 aa4.47□□□□□ -1.69
FOXN3-210ENST00000555658 CSRP2Q16527 193 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms