RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 TTC27Q6P3X3 843 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 NPNTQ6UXI9 565 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 FAM72BQ86X60 149 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 PQLC3Q8N755 202 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 GRK7Q8WTQ7 553 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 HDAC7Q8WUI4 952 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 P3H4Q92791 437 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 FAF2Q96CS3 445 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 SLC39A13Q96H72 371 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 CCDC114Q96M63 670 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 HAPLN3Q96S86 360 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 EPAS1Q99814 870 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 FRMD8P1Q9BZ68 369 aaPredicted RBP9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 ANKZF1Q9H8Y5 726 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 ASAH2Q9NR71 780 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 STIM2Q9P246 746 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 OR12D3Q9UGF7 316 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 HEY1Q9Y5J3 304 aa9.99□□□□□ -0.81
HNRNPC-220ENST00000555585 TARSL2A2RTX5 802 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 FAM187AA6NFU0 413 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 EPOPA6NHQ4 379 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 KCNU1A8MYU2 1149 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 H7C0C1 242 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 I6L893 689 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 APOC4-APOC2K7ER74 178 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 MCF2LO15068 1137 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 TTI1O43156 1089 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 LIASO43766 372 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 XYLBO75191 536 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HEXIM1O94992 359 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 FGF19O95750 216 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 OAS1P00973 400 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 APOC2P02655 101 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HNRNPA1P09651 372 aaKnown RBP eCLIP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 IRF1P10914 325 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PECAM1P16284 738 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 CDC25CP30307 473 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PTGIRP43119 386 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 ATP5OP48047 213 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 NRIP1P48552 1158 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HCAR3P49019 387 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 TUBP50607 506 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 EIF3EP60228 445 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 COG7P83436 770 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 LMNB2Q03252 620 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 RING1Q06587 406 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 BYSLQ13895 437 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PPP1R7Q15435 360 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 DUSP6Q16828 381 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 ZNF697Q5TEC3 545 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 NUGGCQ68CJ6 796 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 TXNDC8Q6A555 127 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 SLC9A4Q6AI14 798 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 RWDD4Q6NW29 188 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 KLHDC10Q6PID8 442 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 RFX8Q6ZV50 586 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PDZD4Q76G19 769 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 GSTA5Q7RTV2 222 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 TMEM150AQ86TG1 271 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 TMC8Q8IU68 726 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 UNC45BQ8IWX7 931 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PLD5Q8N7P1 536 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 ATL2Q8NHH9 583 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 ACTL9Q8TC94 416 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PLD4Q96BZ4 506 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 BTN2A3PQ96KV6 586 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HINFPQ9BQA5 517 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PARD6BQ9BYG5 372 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PRDM16Q9HAZ2 1276 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PIDD1Q9HB75 910 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HCFC1R1Q9NWW0 138 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 SAE1Q9UBE0 346 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 PCYOX1Q9UHG3 505 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 FEZ2Q9UHY8 353 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 DNPEPQ9ULA0 475 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 ZNF148Q9UQR1 794 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 HCFC2Q9Y5Z7 792 aa9.98□□□□□ -0.81
HNRNPC-220ENST00000555585 DENND4CQ5VZ89 1909 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 TRAV19A0A0A6YYK7 116 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 CCDC195A0A1B0GUA6 201 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 A0A1W2PRU2 124 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 DYNC1I1O14576 645 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 LRIG2O94898 1065 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ECEL1O95672 775 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 IGLV3-27P01718 113 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 GJA1P17302 382 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 ERCC2P18074 760 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 HDCP19113 662 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 MCM3P25205 808 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 EPHB2P29323 1055 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 HOXA9P31269 272 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 HARS2P49590 506 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 KCNQ1P51787 676 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 VCPP55072 806 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 GUCY2DQ02846 1103 aa9.97□□□□□ -0.81
HNRNPC-220ENST00000555585 SEMA3BQ13214 749 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms