RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CCDC117Q8IWD4 279 aaPredicted RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 FCRL2Q96LA5 508 aaPredicted RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 NOX5Q96PH1 765 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 GBP4Q96PP9 640 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 NUSAP1Q9BXS6 441 aaKnown RBP25.41■■□□□ 1.66
PRKCH-216ENST00000555542 GGA2Q9UJY4 613 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 PLA2G4CQ9UP65 541 aa25.41■■□□□ 1.66
PRKCH-216ENST00000555542 TNRC6BQ9UPQ9 1833 aaKnown RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 KCNJ18B7U540 433 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 APOEP02649 317 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 PABPC1P11940 636 aaKnown RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 SLC6A4P31645 630 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 KRT9P35527 623 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 YWHAZP63104 245 aaKnown RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 NNTQ13423 1086 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 KCNJ12Q14500 433 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 FAM133BQ5BKY9 247 aaKnown RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 PIK3R6Q5UE93 754 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 SYPL2Q5VXT5 272 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 TMEM215Q68D42 235 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 MFN1Q8IWA4 741 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 AHI1Q8N157 1196 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 ZNF557Q8N988 423 aaPredicted RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 HJURPQ8NCD3 748 aaPredicted RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 AZIN2Q96A70 460 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 IRX2Q9BZI1 471 aaPredicted RBP25.4■■□□□ 1.66
PRKCH-216ENST00000555542 LMBRD1Q9NUN5 540 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 CEP83Q9Y592 693 aa25.4■■□□□ 1.66
PRKCH-216ENST00000555542 ITPKAP23677 461 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 PRKCHP24723 683 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 IRX4P78413 519 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 RAPGEF1Q13905 1077 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 MPP7Q5T2T1 576 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 BEND5Q7L4P6 421 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 CACUL1Q86Y37 369 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 CYB5D2Q8WUJ1 264 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 PPP1R13BQ96KQ4 1090 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 PDCL3Q9H2J4 239 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 SYNCQ9H7C4 482 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 SIX2Q9NPC8 291 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 TMEM9BQ9NQ34 198 aa25.39■■□□□ 1.66
PRKCH-216ENST00000555542 AJAP1Q9UKB5 411 aaPredicted RBP25.39■■□□□ 1.66
PRKCH-216ENST00000555542 CACNA1AO00555 2505 aa25.39■■□□□ 1.65
PRKCH-216ENST00000555542 C4orf47A7E2U8 309 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 CFIP05156 583 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 ACADMP11310 421 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 ZNF33AQ06730 810 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 LMAN2Q12907 356 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 ENPP2Q13822 863 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 DAB2IPQ5VWQ8 1189 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 NADSYN1Q6IA69 706 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 CLEC17AQ6ZS10 378 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 TMPRSS6Q8IU80 811 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 PRCCQ92733 491 aaPredicted RBP25.38■■□□□ 1.65
PRKCH-216ENST00000555542 SIPA1Q96FS4 1042 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 HSPA12BQ96MM6 686 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 MKRN2Q9H000 416 aaKnown RBP25.38■■□□□ 1.65
PRKCH-216ENST00000555542 FAM204AQ9H8W3 233 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 CD93Q9NPY3 652 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 TMEM74BQ9NUR3 256 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 TJP2Q9UDY2 1190 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 PCDHGC3Q9UN70 934 aa25.38■■□□□ 1.65
PRKCH-216ENST00000555542 FOXN3O00409 490 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 TRUB2O95900 331 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 ATP5BP06576 529 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 PNMA6AP0CW24 399 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 HLA-EP13747 358 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 POLR2EP19388 210 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 SNX16P57768 344 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 CDH18Q13634 790 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 DCAF6Q58WW2 860 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 CT47A1Q5JQC4 288 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 MIIPQ5JXC2 388 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 MBLAC2Q68D91 279 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 SLC47A2Q86VL8 602 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 CARNMT1Q8N4J0 409 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 C1orf131Q8NDD1 294 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 CPXM1Q96SM3 734 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 NUCKS1Q9H1E3 243 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 SAMSN1Q9NSI8 373 aaKnown RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 EVLQ9UI08 416 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-216ENST00000555542 PILRBQ9UKJ0 227 aa25.37■■□□□ 1.65
PRKCH-216ENST00000555542 SYNJ2BP-COX16A0A087WUM0 186 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 CD6P30203 668 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 CD70P32970 193 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 BPIFB4P59827 614 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 ZC3H12AQ5D1E8 599 aaKnown RBP25.36■■□□□ 1.65
PRKCH-216ENST00000555542 OR6B2Q6IFH4 312 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 ADIPOR2Q86V24 386 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 RGL4Q8IZJ4 473 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.36■■□□□ 1.65
PRKCH-216ENST00000555542 WFDC5Q8TCV5 224 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 RNF34Q969K3 372 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 SLC39A13Q96H72 371 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 PRICKLE1Q96MT3 831 aaPredicted RBP25.36■■□□□ 1.65
PRKCH-216ENST00000555542 LHX5Q9H2C1 402 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 COX16Q9P0S2 106 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 SLC12A6Q9UHW9 1150 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 NFE2L3Q9Y4A8 694 aa25.36■■□□□ 1.65
PRKCH-216ENST00000555542 GOLGA6L22H0YM25 854 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms