RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ABCB8Q9NUT2 735 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 FBXL12Q9NXK8 326 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 MARCH2Q9P0N8 246 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 CLCA2Q9UQC9 943 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 PCDHB1Q9Y5F3 818 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 PCDHA5Q9Y5H7 936 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 USP3Q9Y6I4 520 aa8.76□□□□□ -1.01
NEK9-206ENST00000555537 A0A1W2PP55 124 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 A0A1W2PR77 199 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 VPS37CA5D8V6 355 aaPredicted RBP8.75□□□□□ -1.01
NEK9-206ENST00000555537 CAPN8A6NHC0 703 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 EIF3DO15371 548 aaKnown RBP eCLIP8.75□□□□□ -1.01
NEK9-206ENST00000555537 MPOP05164 745 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 CDK4P11802 303 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 CKMT2P17540 419 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 CD38P28907 300 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 EPHA8P29322 1005 aaPredicted RBP8.75□□□□□ -1.01
NEK9-206ENST00000555537 SGSHP51688 502 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 ASIC1P78348 528 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 EHHADHQ08426 723 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 SGSM1Q2NKQ1 1148 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 FAM26FQ5R3K3 315 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 MBLAC2Q68D91 279 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 RSRC2Q7L4I2 434 aaKnown RBP8.75□□□□□ -1.01
NEK9-206ENST00000555537 CCDC186Q7Z3E2 898 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 TADA2BQ86TJ2 420 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 LURAP1LQ8IV03 231 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 CPXM2Q8N436 756 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 ZNF276Q8N554 614 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 WFDC5Q8TCV5 224 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 TMA16Q96EY4 203 aaKnown RBP8.75□□□□□ -1.01
NEK9-206ENST00000555537 SLC39A2Q9NP94 309 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 CLIC5Q9NZA1 410 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 NCKAP1Q9Y2A7 1128 aa8.75□□□□□ -1.01
NEK9-206ENST00000555537 COL5A1P20908 1838 aaPredicted RBP8.75□□□□□ -1.01
NEK9-206ENST00000555537 ATMQ13315 3056 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 MGAQ8IWI9 3026 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 TP53BP1Q12888 1972 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 GOLGA6L7A0A1B0GV03 622 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 TLR4O00206 839 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 MID1O15344 667 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SLC28A2O43868 658 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 SDC3O75056 442 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SIN3BO75182 1162 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 RNASEH2AO75792 299 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 WISP1O95388 367 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 MT-CO3P00414 261 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 C7P10643 843 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 PABPC1P11940 636 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 MYF5P13349 255 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 C6P13671 934 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 CD58P19256 250 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 CD70P32970 193 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 ASPAP45381 313 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 PSEN1P49768 467 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 RHDQ02161 417 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 ZBTB16Q05516 673 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 E2F5Q15329 346 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 TTC31Q49AM3 519 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 MPPE1Q53F39 396 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 ZNF394Q53GI3 561 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 KIAA1614Q5VZ46 1190 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 ZNF776Q68DI1 518 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 KANSL1Q7Z3B3 1105 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 KIAA0907Q7Z7F0 614 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 UNC93AQ86WB7 457 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SPATS2Q86XZ4 545 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 MMAAQ8IVH4 418 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 DHX40Q8IX18 779 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 FAM217AQ8IXS0 508 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 DCBLD1Q8N8Z6 715 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 ZNF248Q8NDW4 579 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SKA1Q96BD8 255 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 DUSP16Q9BY84 665 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 RSPH9Q9H1X1 276 aaPredicted RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 PABPC3Q9H361 631 aaKnown RBP8.74□□□□□ -1.01
NEK9-206ENST00000555537 GDF3Q9NR23 364 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SUN2Q9UH99 717 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 SFMBT1Q9UHJ3 866 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 GGA2Q9UJY4 613 aa8.74□□□□□ -1.01
NEK9-206ENST00000555537 KNTC1P50748 2209 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TRIM38O00635 465 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 KLK10O43240 276 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 SIGLEC6O43699 453 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 STX6O43752 255 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 DLDP09622 509 aaKnown RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 P4HA1P13674 534 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 POLR2EP19388 210 aaKnown RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 ARRB1P49407 418 aaPredicted RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 NUMBP49757 651 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TMPRSS3P57727 454 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 NXPH1P58417 271 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 YWHAGP61981 247 aaKnown RBP eCLIP8.73□□□□□ -1.01
NEK9-206ENST00000555537 CLDN10P78369 228 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 TRIP4Q15650 581 aaPredicted RBP8.73□□□□□ -1.01
NEK9-206ENST00000555537 PKDCCQ504Y2 493 aa8.73□□□□□ -1.01
NEK9-206ENST00000555537 SFMBT2Q5VUG0 894 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms