RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 NR2F6P10588 404 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 ZFXP17010 805 aaPredicted RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 CBSP35520 551 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 UBE3AQ05086 875 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 DDX10Q13206 875 aaKnown RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 PDCLQ13371 301 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 FHL1Q13642 323 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 KLF9Q13886 244 aaPredicted RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 PTPRRQ15256 657 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 DLGAP5Q15398 846 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 GALNTL6Q49A17 601 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 PLAC9Q5JTB6 97 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 INTS11Q5TA45 600 aaKnown RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 WDR78Q5VTH9 848 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 MAATS1Q7Z4T9 603 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 SIRT6Q8N6T7 355 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 SEMA6DQ8NFY4 1073 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 OVCA2Q8WZ82 227 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
VRK1-205ENST00000555402 MECRQ9BV79 373 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 NOD2Q9HC29 1040 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 ADAM21Q9UKJ8 722 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 SH2B3Q9UQQ2 575 aa6.04□□□□□ -1.44
VRK1-205ENST00000555402 A8MVJ9 347 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 DLDP09622 509 aaKnown RBP6.03□□□□□ -1.44
VRK1-205ENST00000555402 ALADP13716 330 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 KELP23276 732 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 THBS4P35443 961 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 TUBA4AP68366 448 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 E2F1Q01094 437 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 TFF2Q03403 129 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 SLC10A2Q12908 348 aaPredicted RBP6.03□□□□□ -1.44
VRK1-205ENST00000555402 TRPC3Q13507 836 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 ETFDHQ16134 617 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 NBPF8Q3BBV2 869 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 AASDHQ4L235 1098 aaPredicted RBP6.03□□□□□ -1.44
VRK1-205ENST00000555402 GRHL2Q6ISB3 625 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 ZNF517Q6ZMY9 492 aaPredicted RBP6.03□□□□□ -1.44
VRK1-205ENST00000555402 SYNE3Q6ZMZ3 975 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 TMTC1Q8IUR5 882 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 CPOQ8IVL8 374 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 PPHLN1Q8NEY8 458 aaKnown RBP6.03□□□□□ -1.44
VRK1-205ENST00000555402 HERVK_113Q902F9 699 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 WDYHV1Q96HA8 205 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 PBKQ96KB5 322 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 PRR25Q96S07 402 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 WACQ9BTA9 647 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 SLC26A6Q9BXS9 759 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 ADGRE3Q9BY15 652 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 TWSG1Q9GZX9 223 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 G6PC2Q9NQR9 355 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 ARHGEF3Q9NR81 526 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 MGAT4CQ9UBM8 478 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 SLC13A4Q9UKG4 626 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 BTBD3Q9Y2F9 522 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 DERAQ9Y315 318 aa6.03□□□□□ -1.44
VRK1-205ENST00000555402 TISP43B9A030 160 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 CA12O43570 354 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 SPRY2O43597 315 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 TNFAIP3P21580 790 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 MMP8P22894 467 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 ADRA1DP25100 572 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 CCKBRP32239 447 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 TLE2Q04725 743 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 CBFBQ13951 182 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 KCNJ12Q14500 433 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 MAPRE1Q15691 268 aaKnown RBP6.02□□□□□ -1.45
VRK1-205ENST00000555402 SMAD1Q15797 465 aaKnown RBP6.02□□□□□ -1.45
VRK1-205ENST00000555402 CYP1B1Q16678 543 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 TXNRD1Q16881 649 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 DGAT2L7PQ6IED9 249 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 PARS2Q7L3T8 475 aaKnown RBP6.02□□□□□ -1.45
VRK1-205ENST00000555402 HEATR4Q86WZ0 1026 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 SPATA3Q8NHX4 192 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 FAR2Q96K12 515 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 PAAF1Q9BRP4 392 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 WASH6PQ9NQA3 447 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 RAB21Q9UL25 225 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 VPS4AQ9UN37 437 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 UBE2J1Q9Y385 318 aaPredicted RBP6.02□□□□□ -1.45
VRK1-205ENST00000555402 PCDHB2Q9Y5E7 798 aa6.02□□□□□ -1.45
VRK1-205ENST00000555402 LINC01548A6NM66 108 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 SLC38A8A6NNN8 435 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 M0QYT0 321 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 HOXC11O43248 304 aaPredicted RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 MOSPD3O75425 235 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 NTN1O95631 604 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 TFRCP02786 760 aaKnown RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 NDUFB7P17568 137 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 ENGP17813 658 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 CYP2C18P33260 490 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 MCM5P33992 734 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 FOXG1P55316 489 aaPredicted RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 TXNL4AP83876 142 aaKnown RBP6.01□□□□□ -1.45
VRK1-205ENST00000555402 DEUP1Q05D60 604 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 ANKRD1Q15327 319 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 TBRG1Q3YBR2 411 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 LCE1EQ5T753 118 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 FAM90A2PQ658T7 463 aa6.01□□□□□ -1.45
VRK1-205ENST00000555402 DENND2CQ68D51 928 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms