RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 DEFB106AQ8N104 65 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 MREGQ8N565 214 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 DEPDC1BQ8WUY9 529 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 CTNNBL1Q8WYA6 563 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 BHMTQ93088 406 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 RNF34Q969K3 372 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 NXPE3Q969Y0 559 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 E2F7Q96AV8 911 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 HES6Q96HZ4 224 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 MS4A14Q96JA4 679 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 LINC00597Q9H2U6 94 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 FAM204AQ9H8W3 233 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 POPDC2Q9HBU9 364 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 METTL5Q9NRN9 209 aaKnown RBP10.25□□□□□ -0.77
PSEN1-213ENST00000555386 GTSE1Q9NYZ3 720 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 AMFRQ9UKV5 643 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 TECTAO75443 2155 aa10.25□□□□□ -0.77
PSEN1-213ENST00000555386 GOLGA8KD6RF30 607 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 HSF2BPO75031 334 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 RNF40O75150 1001 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 OLFM2O95897 454 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 MOCS2O96007 188 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 FTLP02792 175 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 SRFP11831 508 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 CORO1AP31146 461 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 SOX9P48436 509 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 KPNA1P52294 538 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 VCPP55072 806 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 CENPCQ03188 943 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 USP4Q13107 963 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 NME3Q13232 169 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 CUL1Q13616 776 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 IER5LQ5T953 404 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 SND1Q7KZF4 910 aaKnown RBP eCLIP10.24□□□□□ -0.772e-8■■■■□ 24.4
PSEN1-213ENST00000555386 TAC4Q86UU9 113 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 NT5DC3Q86UY8 548 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 DENND1CQ8IV53 801 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 RHOT2Q8IXI1 618 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 EMC1Q8N766 993 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 CSGALNACT1Q8TDX6 532 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 DQX1Q8TE96 717 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 CDK5RAP1Q96SZ6 601 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 KIF9Q9HAQ2 790 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 HEBP1Q9NRV9 189 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 OLA1Q9NTK5 396 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 LSM7Q9UK45 103 aaKnown RBP10.24□□□□□ -0.77
PSEN1-213ENST00000555386 DUSP12Q9UNI6 340 aa10.24□□□□□ -0.77
PSEN1-213ENST00000555386 FAM86C2PA6NEL3 165 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 A6NNZ2 444 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DLL1O00548 723 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TRDMT1O14717 391 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 STC2O76061 302 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 HEXIM1O94992 359 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CALB1P05937 261 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 GZMAP12544 262 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 PFKLP17858 780 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CD72P21854 359 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 RRM1P23921 792 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 WEE1P30291 646 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 GGCXP38435 758 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 GABRB2P47870 512 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SULT1E1P49888 294 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TBX4P57082 545 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 COG7P83436 770 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ZXDAP98168 799 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SLC7A5Q01650 507 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 CDO1Q16878 200 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 TUBB8Q3ZCM7 444 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DNAJC24Q6P3W2 148 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MON1BQ7L1V2 547 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DAAM2Q86T65 1068 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DDX42Q86XP3 938 aaKnown RBP eCLIP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 PHF13Q86YI8 300 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ZDHHC17Q8IUH5 632 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 BBS7Q8IWZ6 715 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MCOLN2Q8IZK6 566 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SIX5Q8N196 739 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SCML4Q8N228 414 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 IRF7Q92985 503 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ZNF653Q96CK0 615 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 NAP1L3Q99457 506 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SH3GL2Q99962 352 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ISCUQ9H1K1 167 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 EPHX3Q9H6B9 360 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 DDIT4Q9NX09 232 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 SMARCAL1Q9NZC9 954 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 ZDBF2Q9HCK1 2354 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 MIF4GDA9UHW6 222 aaKnown RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-213ENST00000555386 M0QYT0 321 aa10.23□□□□□ -0.77
PSEN1-213ENST00000555386 AGPSO00116 658 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms