RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PTPN5P54829 565 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 RPS24P62847 133 aaKnown RBP12.82□□□□□ -0.36
SYNE2-214ENST00000554928 OGDHQ02218 1023 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 NHLH1Q02575 133 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 GEN1Q17RS7 908 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 C10orf76Q5T2E6 689 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 ARTNQ5T4W7 220 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 BNIPLQ7Z465 357 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 C14orf80Q86SX3 495 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 CIR1Q86X95 450 aaPredicted RBP12.82□□□□□ -0.36
SYNE2-214ENST00000554928 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 CFAP52Q8N1V2 620 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 SPEM1Q8N4L4 309 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 DDI1Q8WTU0 396 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 ERLEC1Q96DZ1 483 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 ACOX2Q99424 681 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 PRMT1Q99873 361 aaKnown RBP12.82□□□□□ -0.36
SYNE2-214ENST00000554928 TRIM62Q9BVG3 475 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 MAGEB5Q9BZ81 275 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 STIM2Q9P246 746 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 ARHGAP20Q9P2F6 1191 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 R4GN57 208 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 CACNA1HO95180 2353 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
SYNE2-214ENST00000554928 KIAA1549LQ6ZVL6 1849 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TBC1D3BA6NDS4 549 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 C2CD4BA6NLJ0 364 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 CBFA2T2O43439 604 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TBL1XO60907 577 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 ADAM23O75077 832 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 APOEP02649 317 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TACR2P21452 398 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 RFC1P35251 1148 aaPredicted RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 WASP42768 502 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SLC11A2P49281 568 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 DGKGP49619 791 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 CXCR3P49682 368 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 NUMBP49757 651 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 GSCP56915 257 aaPredicted RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SNX16P57768 344 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 RPL7AP62424 266 aaKnown RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 ATP11AP98196 1134 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SLC25A52Q3SY17 297 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 MPPE1Q53F39 396 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 MS4A13Q5J8X5 152 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 PPP1R15BQ5SWA1 713 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 EGFLAMQ63HQ2 1017 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TMEM215Q68D42 235 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 RNF43Q68DV7 783 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SPECC1LQ69YQ0 1117 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 WDR59Q6PJI9 974 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SARM1Q6SZW1 724 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SYNPOQ8N3V7 929 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 ALLCQ8N6M5 410 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 IL17RCQ8NAC3 791 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 MSANTD4Q8NCY6 345 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 SORCS1Q8WY21 1168 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 ATOH1Q92858 354 aaPredicted RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TMA16Q96EY4 203 aaKnown RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 XPO6Q96QU8 1125 aaKnown RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 LUC7L2Q9Y383 392 aaKnown RBP12.81□□□□□ -0.36
SYNE2-214ENST00000554928 HS3ST4Q9Y661 456 aa12.81□□□□□ -0.36
SYNE2-214ENST00000554928 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CHURC1-FNTBB4DL54 471 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 SGK1O00141 431 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 PAGE1O75459 146 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CALB1P05937 261 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 PDGFRAP16234 1089 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 HLA-FP30511 346 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CCR1P32246 355 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CXCL12P48061 93 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 DEUP1Q05D60 604 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 GSE1Q14687 1217 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CDO1Q16878 200 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 FBXO43Q4G163 708 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 TDRD12Q587J7 1177 aaKnown RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 FSCBQ5H9T9 825 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 TMEM92Q6UXU6 159 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 CHSY1Q86X52 802 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 FAM131BQ86XD5 332 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 C3orf20Q8ND61 904 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 SYN2Q92777 582 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 RNF34Q969K3 372 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 IGSF8Q969P0 613 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 PGAP3Q96FM1 320 aaPredicted RBP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 LMLNQ96KR4 655 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 BTN2A3PQ96KV6 586 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 TKTL2Q9H0I9 626 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 KCNH6Q9H252 994 aa12.8□□□□□ -0.36
SYNE2-214ENST00000554928 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
SYNE2-214ENST00000554928 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms