RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 PGM3O95394 542 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 LGALS2P05162 132 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 RALBP11234 206 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 ANPEPP15144 967 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 OAZ1P54368 228 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 HDAC4P56524 1084 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 MAP3K7CLP57077 242 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TWF2Q6IBS0 349 aaKnown RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TSHZ1Q6ZSZ6 1077 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 RNF217Q8TC41 542 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 GCNAQ96QF7 691 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 AGAP2Q99490 1192 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 KCNK13Q9HB14 408 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 CYP4F12Q9HCS2 524 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 IARS2Q9NSE4 1012 aaKnown RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 GTSE1Q9NYZ3 720 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 GREB1LQ9C091 1923 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 H3BRB1 525 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PIGRP01833 764 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 SP100P23497 879 aaPredicted RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TARBP2Q15633 366 aaKnown RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PDPK2PQ6A1A2 396 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 RELL1Q8IUW5 271 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TUT1Q9H6E5 874 aaKnown RBP12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PPCSQ9HAB8 311 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 USP29Q9HBJ7 922 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TMEM216Q9P0N5 145 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TLK1Q9UKI8 766 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 LRCH1Q9Y2L9 728 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 COL4A5P29400 1685 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 LTBP4Q8N2S1 1624 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 TRIP11Q15643 1979 aa12.2□□□□□ -0.46
XRCC3-208ENST00000554811 BPGMP07738 259 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 CTSHP09668 335 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NELFEP18615 380 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 TGM2P21980 687 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 PLK1P53350 603 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 DEUP1Q05D60 604 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 PCSK7Q16549 785 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 MMEL1Q495T6 779 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 MAB21L3Q8N8X9 362 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SREK1Q8WXA9 508 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 OMDQ99983 421 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NUF2Q9BZD4 464 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 LHX5Q9H2C1 402 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NRXN2Q9P2S2 1712 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SDR42E2A6NKP2 422 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 EEF2KO00418 725 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 HUS1O60921 280 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 AMHP03971 560 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 GNAZP19086 355 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 EPHA3P29320 983 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 GARSP41250 739 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 DSG1Q02413 1049 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 PIWIL2Q8TC59 973 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 MCRS1Q96EZ8 462 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 CSPG4P5Q96PW8 444 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 PANX3Q96QZ0 392 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 ADA2Q9NZK5 511 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 CORO1CQ9ULV4 474 aaPredicted RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 TNFSF13BQ9Y275 285 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 TCRBV5S1A1TA0A578 114 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SPAG6O75602 509 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 RFPL1O75677 317 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NCAM1P13591 858 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NME5P56597 212 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 PDK2Q15119 407 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SPDYAQ5MJ70 313 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SPATA24Q86W54 205 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 KBTBD2Q8IY47 623 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 FAM156AQ8NDB6 213 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 SKA1Q96BD8 255 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 MFSD3Q96ES6 412 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 CATSPER2Q96P56 530 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 TSR3Q9UJK0 312 aaKnown RBP12.19□□□□□ -0.46
XRCC3-208ENST00000554811 NUP205Q92621 2012 aa12.19□□□□□ -0.46
XRCC3-208ENST00000554811 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 RECQL4O94761 1208 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CPA3P15088 417 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 IRF9Q00978 393 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF460Q14592 562 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 POU6F1Q14863 301 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.18□□□□□ -0.46
XRCC3-208ENST00000554811 CERCAMQ5T4B2 595 aa12.18□□□□□ -0.46
XRCC3-208ENST00000554811 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms