RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 CHST9Q7L1S5 443 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 BHLHA9Q7RTU4 235 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 SIX6OS1Q8N1H7 587 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 RHBDD1Q8TEB9 315 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 CYB5D2Q8WUJ1 264 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 CDC6Q99741 560 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 TMEM245Q9H330 911 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 CCDC86Q9H6F5 360 aaKnown RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 C6orf106Q9H6K1 298 aaPredicted RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 FBRSQ9HAH7 460 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 KIAA1522Q9P206 1035 aaPredicted RBP13.02□□□□□ -0.33
RDH11-207ENST00000554731 SFMBT1Q9UHJ3 866 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 STOML2Q9UJZ1 356 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 TSPAN16Q9UKR8 245 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 PCDHGB2Q9Y5G2 931 aa13.02□□□□□ -0.33
RDH11-207ENST00000554731 ATP5BP06576 529 aaKnown RBP13.01□□□□□ -0.33
RDH11-207ENST00000554731 CD19P15391 556 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 ACSL1P33121 698 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 CUL2Q13617 745 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 SUZ12Q15022 739 aaKnown RBP13.01□□□□□ -0.33
RDH11-207ENST00000554731 TCERG1LQ5VWI1 586 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 DBX2Q6ZNG2 339 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 AHI1Q8N157 1196 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 ZNF366Q8N895 744 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.01□□□□□ -0.33
RDH11-207ENST00000554731 BAHD1Q8TBE0 780 aaPredicted RBP13.01□□□□□ -0.33
RDH11-207ENST00000554731 EDEM1Q92611 657 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 CCDC34Q96HJ3 373 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 BTBD1Q9H0C5 482 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 ABCC13Q9NSE7 274 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.01□□□□□ -0.33
RDH11-207ENST00000554731 GPSM3Q9Y4H4 160 aa13.01□□□□□ -0.33
RDH11-207ENST00000554731 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
RDH11-207ENST00000554731 A0A1W2PQ27 194 aa13□□□□□ -0.33
RDH11-207ENST00000554731 A0A1W2PQ64 194 aa13□□□□□ -0.33
RDH11-207ENST00000554731 YJEFN3A6XGL0 299 aa13□□□□□ -0.33
RDH11-207ENST00000554731 E7ENQ6 273 aa13□□□□□ -0.33
RDH11-207ENST00000554731 MSI1O43347 362 aaKnown RBP13□□□□□ -0.33
RDH11-207ENST00000554731 ZNF202O95125 648 aa13□□□□□ -0.33
RDH11-207ENST00000554731 SEMA4FO95754 770 aa13□□□□□ -0.33
RDH11-207ENST00000554731 DNTTP04053 509 aa13□□□□□ -0.33
RDH11-207ENST00000554731 DLDP09622 509 aaKnown RBP13□□□□□ -0.33
RDH11-207ENST00000554731 SETSIPP0DME0 302 aa13□□□□□ -0.33
RDH11-207ENST00000554731 C7P10643 843 aa13□□□□□ -0.33
RDH11-207ENST00000554731 PABPC1P11940 636 aaKnown RBP13□□□□□ -0.33
RDH11-207ENST00000554731 KIF19Q2TAC6 998 aa13□□□□□ -0.33
RDH11-207ENST00000554731 TTC31Q49AM3 519 aaPredicted RBP13□□□□□ -0.33
RDH11-207ENST00000554731 CBWD6Q4V339 395 aa13□□□□□ -0.33
RDH11-207ENST00000554731 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
RDH11-207ENST00000554731 CBWD3Q5JTY5 395 aa13□□□□□ -0.33
RDH11-207ENST00000554731 CBWD5Q5RIA9 395 aa13□□□□□ -0.33
RDH11-207ENST00000554731 MBLAC2Q68D91 279 aa13□□□□□ -0.33
RDH11-207ENST00000554731 KIAA0907Q7Z7F0 614 aaPredicted RBP13□□□□□ -0.33
RDH11-207ENST00000554731 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
RDH11-207ENST00000554731 SMYD4Q8IYR2 804 aaPredicted RBP13□□□□□ -0.33
RDH11-207ENST00000554731 SCML4Q8N228 414 aa13□□□□□ -0.33
RDH11-207ENST00000554731 UBA3Q8TBC4 463 aa13□□□□□ -0.33
RDH11-207ENST00000554731 KCTD13Q8WZ19 329 aa13□□□□□ -0.33
RDH11-207ENST00000554731 SCAND2PQ9GZW5 306 aaPredicted RBP13□□□□□ -0.33
RDH11-207ENST00000554731 GOLPH3LQ9H4A5 285 aa13□□□□□ -0.33
RDH11-207ENST00000554731 TM9SF3Q9HD45 589 aa13□□□□□ -0.33
RDH11-207ENST00000554731 OSGEPQ9NPF4 335 aa13□□□□□ -0.33
RDH11-207ENST00000554731 PRSS16Q9NQE7 514 aa13□□□□□ -0.33
RDH11-207ENST00000554731 CNGB3Q9NQW8 809 aa13□□□□□ -0.33
RDH11-207ENST00000554731 ANKRD6Q9Y2G4 727 aa13□□□□□ -0.33
RDH11-207ENST00000554731 COQ4Q9Y3A0 265 aa13□□□□□ -0.33
RDH11-207ENST00000554731 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
RDH11-207ENST00000554731 O00370 1275 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 SLC16A3O15427 465 aaKnown RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 FSBPO95073 299 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 ATXN1LP0C7T5 689 aaKnown RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 VDRP11473 427 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 POLR2EP19388 210 aaKnown RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 GRIA4P48058 902 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 RPS14P62263 151 aaKnown RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 ACAP1Q15027 740 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 PTPRNQ16849 979 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 ZNF776Q68DI1 518 aaPredicted RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 MSANTD2Q6P1R3 559 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 ZNF557Q8N988 423 aaPredicted RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 GOLGA1Q92805 767 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 BIRC7Q96CA5 298 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 TSG101Q99816 390 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 IRX2Q9BZI1 471 aaPredicted RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 SGK2Q9HBY8 427 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 TOR4AQ9NXH8 423 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 SUN2Q9UH99 717 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 KIAA1257Q9ULG3 409 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 SNX11Q9Y5W9 270 aa12.99□□□□□ -0.33
RDH11-207ENST00000554731 URB1O60287 2271 aaKnown RBP12.99□□□□□ -0.33
RDH11-207ENST00000554731 PLXNB3Q9ULL4 1909 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 GOLGA8CPA6NN73 597 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 TBL1XO60907 577 aa12.98□□□□□ -0.33
RDH11-207ENST00000554731 DKK1O94907 266 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms