RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ACO1P21399 889 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TMED10P49755 219 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 VPS72Q15906 364 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MREGQ8N565 214 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DTX3Q8N9I9 347 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GAS2L1Q99501 681 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FNIP2Q9P278 1114 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SNX13Q9Y5W8 968 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SPEF2Q9C093 1822 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CLEC3AO75596 197 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ECDO95905 644 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RHOAP61586 193 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GRIK3Q13003 919 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EMC2Q15006 297 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PIK3R6Q5UE93 754 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 IZUMO3Q5VZ72 239 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BEND4Q6ZU67 534 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAR1Q8WVX9 515 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TMCC2O75069 709 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 VPS4BO75351 444 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HSD17B2P37059 387 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BIKQ13323 160 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TRIM42Q8IWZ5 723 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ARHGEF26Q96DR7 871 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 REXO5Q96IC2 774 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 C9orf72Q96LT7 481 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NOL6Q9H6R4 1146 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EIF2B4Q9UI10 523 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MED7O43513 233 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RAD23BP54727 409 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MTTPP55157 894 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EIF3EP60228 445 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BTN3A2P78410 334 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CDK17Q00537 523 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RUNX1T1Q06455 604 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF177Q13360 481 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NFATC2Q13469 925 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CBWD3Q5JTY5 395 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CBWD5Q5RIA9 395 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MLIPQ5VWP3 458 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAM228AQ86W67 206 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 S100PBPQ96BU1 408 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 IL17RAQ96F46 866 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ANKRD27Q96NW4 1050 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PITPNM3Q9BZ71 974 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CTPS2Q9NRF8 586 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TRMT13Q9NUP7 481 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ANGPT2O15123 496 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PLATP00750 562 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TTLL4Q14679 1199 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SLFN12LQ6IEE8 588 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MPP5Q8N3R9 675 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ATG4AQ8WYN0 398 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RBCK1Q9BYM8 510 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM60Q9H2L4 133 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HMG20AQ9NP66 347 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NOP53Q9NZM5 478 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 HPS5Q9UPZ3 1129 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KLRG2A4D1S0 409 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PLK4O00444 970 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 RAD51DO75771 328 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LCP2Q13094 533 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GRM2Q14416 872 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 GRB14Q14449 540 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PPP1R15BQ5SWA1 713 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NAIF1Q69YI7 327 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 BARGINQ6ZT62 677 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAM129CQ86XR2 697 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TMEM51Q9NW97 253 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 FAM118AQ9NWS6 357 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PYCARD-AS1I3L0S3 204 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 KPNA5O15131 536 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ALOX12P18054 663 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PSMD8P48556 350 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 INPP5AQ14642 412 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 NEK10Q6ZWH5 1172 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 LONP2Q86WA8 852 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MICU2Q8IYU8 434 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF433Q8N7K0 673 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EPS8L3Q8TE67 593 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 P2RX7Q99572 595 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EPS8L2Q9H6S3 715 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CNOT10Q9H9A5 744 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF556Q9HAH1 456 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SESN1Q9Y6P5 492 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MAPKBP1O60336 1514 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 A0A0B4J269 797 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 CPSF4LA6NMK7 179 aaKnown RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 B4DGG1 531 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 MAFO75444 373 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SLC2A4P14672 509 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 EFHC2Q5JST6 749 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DPF2Q92785 391 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 PRRG3Q9BZD7 231 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 TM6SF2Q9BZW4 377 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 DCTPP1Q9H773 170 aa3.38□□□□□ -1.87
SYNE2-212ENST00000554584 SNTG2Q9NY99 539 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms