RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 ERLEC1Q96DZ1 483 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 SIPA1Q96FS4 1042 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 SLC39A13Q96H72 371 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 CNTNAP3BQ96NU0 1288 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 DDX50Q9BQ39 737 aaKnown RBP11.57□□□□□ -0.56
ABCD4-221ENST00000554453 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 CNTNAP3Q9BZ76 1288 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 CIPCQ9C0C6 399 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 MKRN2Q9H000 416 aaKnown RBP11.57□□□□□ -0.56
ABCD4-221ENST00000554453 MIS12Q9H081 205 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 SLC6A17Q9H1V8 727 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 CAPN10Q9HC96 672 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 USP36Q9P275 1121 aaKnown RBP11.57□□□□□ -0.56
ABCD4-221ENST00000554453 PLA2G4CQ9UP65 541 aa11.57□□□□□ -0.56
ABCD4-221ENST00000554453 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 BECN2A8MW95 431 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 PABPC1P11940 636 aaKnown RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CEACAM1P13688 526 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 PON1P27169 355 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CD6P30203 668 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 OXTRP30559 389 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 SLC6A4P31645 630 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CAMK2GQ13555 558 aaPredicted RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 FAM133BQ5BKY9 247 aaKnown RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 RFWD3Q6PCD5 774 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 KIAA1324Q6UXG2 1013 aaKnown RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CHST9Q7L1S5 443 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 WDTC1Q8N5D0 677 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 FIBINQ8TAL6 211 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 DQX1Q8TE96 717 aaKnown RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 DNASE2BQ8WZ79 361 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 LMLNQ96KR4 655 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 FCRL2Q96LA5 508 aaPredicted RBP11.56□□□□□ -0.56
ABCD4-221ENST00000554453 TMEM245Q9H330 911 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 THAP9Q9H5L6 903 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 ABCB8Q9NUT2 735 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 SUN2Q9UH99 717 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CYTH4Q9UIA0 394 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 NAALADL1Q9UQQ1 740 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 TLR6Q9Y2C9 796 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 NFE2L3Q9Y4A8 694 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 DNAH14Q0VDD8 3507 aa11.56□□□□□ -0.56
ABCD4-221ENST00000554453 CHD8Q9HCK8 2581 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 METTL12A8MUP2 240 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 UPK3BL1B0FP48 263 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 UPK3BL2E5RIL1 263 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 PAPSS1O43252 624 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 THAP12O43422 761 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 TBL1XO60907 577 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 IGLV3-19P01714 112 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 ATP5BP06576 529 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 EPHX1P07099 455 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 DLDP09622 509 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 ENGP17813 658 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 PRKCHP24723 683 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 NOVA1P51513 510 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 TPMTP51580 245 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SGSHP51688 502 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 COPAP53621 1224 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 YWHAZP63104 245 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SHC2P98077 582 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 ARID5AQ03989 594 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 GFPT1Q06210 699 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 EIF4EBP2Q13542 120 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 EXOC3L4Q17RC7 722 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 WDR45BQ5MNZ6 344 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SYCP2LQ5T4T6 812 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SYPL2Q5VXT5 272 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 MBLAC2Q68D91 279 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SERPINA13PQ6UXR4 307 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 AHI1Q8N157 1196 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 ZNF557Q8N988 423 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 CADM4Q8NFZ8 388 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 OR2T3Q8NH03 318 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SHC3Q92529 594 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 PRCCQ92733 491 aaPredicted RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 TTC17Q96AE7 1141 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 FAM149B1Q96BN6 582 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 TOE1Q96GM8 510 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 HSPA12BQ96MM6 686 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 LHX5Q9H2C1 402 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 ACP6Q9NPH0 428 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 CD93Q9NPY3 652 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
ABCD4-221ENST00000554453 GGA2Q9UJY4 613 aa11.55□□□□□ -0.56
ABCD4-221ENST00000554453 KCNJ18B7U540 433 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 FOXN3O00409 490 aaPredicted RBP11.54□□□□□ -0.56
ABCD4-221ENST00000554453 ARHGAP33O14559 1287 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 CAPN9O14815 690 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 GIPC1O14908 333 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 CFIP05156 583 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 GLI1P08151 1106 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 SYPP08247 313 aa11.54□□□□□ -0.56
ABCD4-221ENST00000554453 HLA-EP13747 358 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms