RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CHPFQ8IZ52 775 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 MSANTD4Q8NCY6 345 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ZNF397Q8NF99 534 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 MDGA1Q8NFP4 955 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 UCMAQ8WVF2 138 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 DDX1Q92499 740 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 TMA16Q96EY4 203 aaKnown RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 PCMTD1Q96MG8 357 aaPredicted RBP13.57□□□□□ -0.24
SHMT2-211ENST00000554310 SPAG5Q96R06 1193 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ERGIC2Q96RQ1 377 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 FAM204AQ9H8W3 233 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 HCN2Q9UL51 889 aa13.57□□□□□ -0.24
SHMT2-211ENST00000554310 SDK1Q7Z5N4 2213 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 MUC22E2RYF6 1773 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 TCRBV21S2A2A0A5A6 115 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 EPHB6O15197 1021 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 LRP3O75074 770 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 GFPT2O94808 682 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 SLC2A3P11169 496 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 ATP1A3P13637 1013 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 SOX5P35711 763 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 SCNN1AP37088 669 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 STAT1P42224 750 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 CDK17Q00537 523 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 SLC6A3Q01959 620 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 MTA1Q13330 715 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 TAF5Q15542 800 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 GEN1Q17RS7 908 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 DCAF6Q58WW2 860 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 TAF3Q5VWG9 929 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 NADSYN1Q6IA69 706 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 OR6B2Q6IFH4 312 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 DEFB106AQ8N104 65 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 DCLK2Q8N568 766 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 WFIKKN2Q8TEU8 576 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 LOXL4Q96JB6 756 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 ZC3H10Q96K80 434 aaKnown RBP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 BTN2A3PQ96KV6 586 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 GABRG3Q99928 467 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 BCCIPQ9P287 314 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 NOCTQ9UK39 431 aaKnown RBP13.56□□□□□ -0.24
SHMT2-211ENST00000554310 CACNA1AO00555 2505 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 CKAP5Q14008 2032 aa13.56□□□□□ -0.24
SHMT2-211ENST00000554310 TSPAN3O60637 253 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 MOCS2O96007 188 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 SLC6A4P31645 630 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 GBP1P32455 592 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 GABRB2P47870 512 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 NOMO3P69849 1222 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 CDR2Q01850 454 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 EIF4EBP2Q13542 120 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 ELF2Q15723 593 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 USP39Q53GS9 565 aaKnown RBP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 RFWD3Q6PCD5 774 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 ERICH1Q86X53 443 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 OLIG1Q8TAK6 271 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 HMGB4Q8WW32 186 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 C18orf8Q96DM3 657 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 SPACA7Q96KW9 195 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 ACOX2Q99424 681 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 TPSD1Q9BZJ3 242 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 DDIT4Q9NX09 232 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 ELOVL2Q9NXB9 296 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 RRN3Q9NYV6 651 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 THAP10Q9P2Z0 257 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-211ENST00000554310 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 RALGAPA1Q6GYQ0 2036 aa13.55□□□□□ -0.24
SHMT2-211ENST00000554310 A0A1W2PQF6 199 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 ZBTB24O43167 697 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-211ENST00000554310 TIMM44O43615 452 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 TBL1XO60907 577 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 GRAP2O75791 330 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 EPN2O95208 641 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 MMEP08473 750 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
SHMT2-211ENST00000554310 HLA-FP30511 346 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 CCR1P32246 355 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 NOS2P35228 1153 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 MATKP42679 507 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 WASP42768 502 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 SGSHP51688 502 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 PITX1P78337 314 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-211ENST00000554310 LMNB2Q03252 620 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 ENPP2Q13822 863 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 STARD3Q14849 445 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 PLK5Q496M5 336 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 ZC3H12AQ5D1E8 599 aaKnown RBP13.54□□□□□ -0.24
SHMT2-211ENST00000554310 MS4A13Q5J8X5 152 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms