RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 HOXD9P28356 352 aaPredicted RBP29.46■■■□□ 2.31
PCNX1-206ENST00000554292 SDC4P31431 198 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 SLC6A4P31645 630 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 SEC13P55735 322 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 CSTF1Q05048 431 aaKnown RBP29.46■■■□□ 2.31
PCNX1-206ENST00000554292 NADSYN1Q6IA69 706 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 RFWD3Q6PCD5 774 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 OLIG1Q8TAK6 271 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 KCNV2Q8TDN2 545 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 USP33Q8TEY7 942 aa29.46■■■□□ 2.31
PCNX1-206ENST00000554292 GOLGA6L7A0A1B0GV03 622 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 PDGFRAP16234 1089 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 CXCR3P49682 368 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 MESP2Q0VG99 397 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 MS4A13Q5J8X5 152 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 OTUD1Q5VV17 481 aaPredicted RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 HGSNATQ68CP4 663 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 TRMT11Q7Z4G4 463 aaKnown RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 PHLDB2Q86SQ0 1253 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 CCDC117Q8IWD4 279 aaPredicted RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 MAML2Q8IZL2 1156 aaPredicted RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 EMC1Q8N766 993 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 ATOH1Q92858 354 aaPredicted RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 TRIM11Q96F44 468 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 CFAP57Q96MR6 1250 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 FAM126AQ9BYI3 521 aaPredicted RBP29.45■■■□□ 2.31
PCNX1-206ENST00000554292 RBSNQ9H1K0 784 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 WDCPQ9H6R7 721 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 PIGVQ9NUD9 493 aa29.45■■■□□ 2.31
PCNX1-206ENST00000554292 FANCMQ8IYD8 2048 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 SIGLEC16A6NMB1 481 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 TMCO5BA8MYB1 307 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 F5H5T6 163 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 DDX3XO00571 662 aaKnown RBP eCLIP29.44■■■□□ 2.32e-9■■□□□ 12.7
PCNX1-206ENST00000554292 TBL1XO60907 577 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 CISD3P0C7P0 127 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 SP9P0CG40 484 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 DESP17661 470 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 TACR2P21452 398 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 RDXP35241 583 aaKnown RBP29.44■■■□□ 2.3
PCNX1-206ENST00000554292 SATB1Q01826 763 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 E2F5Q15329 346 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 TSR1Q2NL82 804 aaKnown RBP29.44■■■□□ 2.3
PCNX1-206ENST00000554292 C2orf27AQ580R0 203 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 ACBD5Q5T8D3 534 aaPredicted RBP29.44■■■□□ 2.3
PCNX1-206ENST00000554292 RXFP2Q8WXD0 754 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 TAS2R14Q9NYV8 317 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 SLC8A2Q9UPR5 921 aa29.44■■■□□ 2.3
PCNX1-206ENST00000554292 C2CD4BA6NLJ0 364 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 RTN2O75298 545 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 HNRNPH3P31942 346 aaKnown RBP29.43■■■□□ 2.3
PCNX1-206ENST00000554292 PTPN9P43378 593 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 NRLP54845 237 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 RAP1GAP2Q684P5 730 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 TRNP1Q6NT89 227 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 PKN3Q6P5Z2 889 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 ZC3H14Q6PJT7 736 aaKnown RBP29.43■■■□□ 2.3
PCNX1-206ENST00000554292 SYT13Q7L8C5 426 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 ANKS1BQ7Z6G8 1248 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 DRC7Q8IY82 874 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 LGI2Q8N0V4 545 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 OR8K1Q8NGG5 319 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 P2RY11Q96G91 374 aa29.43■■■□□ 2.3
PCNX1-206ENST00000554292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.43■■■□□ 2.3
PCNX1-206ENST00000554292 ZNHIT6Q9NWK9 470 aaKnown RBP29.43■■■□□ 2.3
PCNX1-206ENST00000554292 XPO7Q9UIA9 1087 aaKnown RBP29.43■■■□□ 2.3
PCNX1-206ENST00000554292 TRIM24O15164 1050 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 TFE3P19532 575 aaPredicted RBP29.42■■■□□ 2.3
PCNX1-206ENST00000554292 RRM1P23921 792 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 RABGAP1LQ5R372 815 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 TTC39BQ5VTQ0 682 aaPredicted RBP29.42■■■□□ 2.3
PCNX1-206ENST00000554292 DCUN1D2Q6PH85 259 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 JOSD2Q8TAC2 188 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 UCMAQ8WVF2 138 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 PRICKLE1Q96MT3 831 aaPredicted RBP29.42■■■□□ 2.3
PCNX1-206ENST00000554292 PARVAQ9NVD7 372 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 ARHGEF38Q9NXL2 777 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 STARD13Q9Y3M8 1113 aa29.42■■■□□ 2.3
PCNX1-206ENST00000554292 FTLP02792 175 aaPredicted RBP29.41■■■□□ 2.3
PCNX1-206ENST00000554292 MYBL1P10243 752 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 GPD1P21695 349 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 TIE1P35590 1138 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 KIR2DL1P43626 348 aaPredicted RBP29.41■■■□□ 2.3
PCNX1-206ENST00000554292 ATP11AP98196 1134 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 EIF4HQ15056 248 aaKnown RBP29.41■■■□□ 2.3
PCNX1-206ENST00000554292 RNF43Q68DV7 783 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 STRADAQ7RTN6 431 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 BNIPLQ7Z465 357 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 SFTPA1Q8IWL2 248 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 ZNF513Q8N8E2 541 aaPredicted RBP29.41■■■□□ 2.3
PCNX1-206ENST00000554292 WFIKKN2Q8TEU8 576 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 DNAJC7Q99615 494 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 ADAM33Q9BZ11 813 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 TKTL2Q9H0I9 626 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 CALCOCO1Q9P1Z2 691 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 ADAMTS1Q9UHI8 967 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 MMP17Q9ULZ9 603 aa29.41■■■□□ 2.3
PCNX1-206ENST00000554292 TCRBV5S1A1TA0A578 114 aa29.4■■■□□ 2.3
PCNX1-206ENST00000554292 PAGE1O75459 146 aa29.4■■■□□ 2.3
PCNX1-206ENST00000554292 ENDOD1O94919 500 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms