RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 MAATS1Q7Z4T9 603 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 DDX42Q86XP3 938 aaKnown RBP eCLIP7.91□□□□□ -1.14
TDP1-209ENST00000554180 ZDHHC14Q8IZN3 488 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 PYROXD2Q8N2H3 581 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 PQLC3Q8N755 202 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 PLD5Q8N7P1 536 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 EFHBQ8N7U6 833 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 NOA1Q8NC60 698 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 LRRN4CLQ8ND94 238 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 PCDH19Q8TAB3 1148 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 CCDC26Q8TAB7 109 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 GRK7Q8WTQ7 553 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 NKD2Q969F2 451 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 MAGOHBQ96A72 148 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 TBC1D31Q96DN5 1066 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 ZFRQ96KR1 1074 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 DDX50Q9BQ39 737 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 HERPUD2Q9BSE4 406 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 KLF16Q9BXK1 252 aaPredicted RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 HEMGNQ9BXL5 484 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 AP1M1Q9BXS5 423 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 ATXN3LQ9H3M9 355 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 ARHGEF4Q9NR80 690 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 DNMT3BQ9UBC3 853 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 PPARGC1AQ9UBK2 798 aaKnown RBP7.91□□□□□ -1.14
TDP1-209ENST00000554180 STOML2Q9UJZ1 356 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 NEU3Q9UQ49 428 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 NR2E1Q9Y466 385 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 RAD54BQ9Y620 910 aa7.91□□□□□ -1.14
TDP1-209ENST00000554180 MTCL1Q9Y4B5 1905 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 CCDC195A0A1B0GUA6 201 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 A0A1W2PRU2 124 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 FAM187AA6NFU0 413 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 WASH4PA8MWX3 477 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 FAM72CH0Y354 149 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 MCF2LO15068 1137 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 DCLK1O15075 740 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 NCAM2O15394 837 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 DAPK3O43293 454 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 CREB3O43889 395 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 STC2O76061 302 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 GAS8O95995 478 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 MOCS2O96007 188 aaPredicted RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 CKMP06732 381 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 TCF3P15923 654 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 EPHB2P29323 1055 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 WEE1P30291 646 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 COILP38432 576 aaPredicted RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 SLC11A2P49281 568 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 VCPP55072 806 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 CYP4F8P98187 520 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 ADCY2Q08462 1091 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 XRCC4Q13426 336 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 BYSLQ13895 437 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 PAFAH1B3Q15102 231 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 NOMO1Q15155 1222 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 MS4A13Q5J8X5 152 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 PRSS36Q5K4E3 855 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 FAM72AQ5TYM5 149 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 PIK3R6Q5UE93 754 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 NCBP2-AS2Q69YL0 99 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 TXNDC8Q6A555 127 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 FAM72DQ6L9T8 149 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 CCDC137Q6PK04 289 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 TMCO3Q6UWJ1 677 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 LRRC31Q6UY01 552 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 ADAT2Q7Z6V5 191 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 FAM72BQ86X60 149 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 ZNF683Q8IZ20 524 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 CMTM8Q8IZV2 173 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 LZTR1Q8N653 840 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 GPR161Q8N6U8 529 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 KIAA1958Q8N8K9 716 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 VN1R2Q8NFZ6 395 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 SLC35B2Q8TB61 432 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 SHKBP1Q8TBC3 707 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 ACTL9Q8TC94 416 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 SMG7Q92540 1137 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 P3H4Q92791 437 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 HAUS1Q96CS2 278 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 KRT12Q99456 494 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 PRMT1Q99873 361 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 RNF38Q9H0F5 515 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 DDX47Q9H0S4 455 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 TASP1Q9H6P5 420 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 CATSPERBQ9H7T0 1116 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 TRPC7Q9HCX4 862 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 TMPRSS4Q9NRS4 437 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 STIM2Q9P246 746 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 LSM7Q9UK45 103 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 ARHGAP26Q9UNA1 814 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 DRG1Q9Y295 367 aaKnown RBP7.9□□□□□ -1.14
TDP1-209ENST00000554180 ZNF510Q9Y2H8 683 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 HS3ST4Q9Y661 456 aa7.9□□□□□ -1.14
TDP1-209ENST00000554180 MYO9BQ13459 2157 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 CFAP69A5D8W1 941 aa7.89□□□□□ -1.15
TDP1-209ENST00000554180 HACD1B0YJ81 288 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms