RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 UBXN4Q92575 508 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 P3H4Q92791 437 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 AZIN2Q96A70 460 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 MAGOHBQ96A72 148 aaKnown RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CSPG4P5Q96PW8 444 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CYP2S1Q96SQ9 504 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 KLF16Q9BXK1 252 aaPredicted RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 AP1M1Q9BXS5 423 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 RNF38Q9H0F5 515 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 HCFC1R1Q9NWW0 138 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 SMPD4Q9NXE4 827 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CWC15Q9P013 229 aaKnown RBP10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 SH3BP1Q9Y3L3 701 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 CPQQ9Y646 472 aa10.82□□□□□ -0.68
TMEM55B-205ENST00000554028 PDE2AO00408 941 aaPredicted RBP10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 FGF10O15520 208 aaPredicted RBP10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 ACSL4O60488 711 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 LATS1O95835 1130 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 IGLV3-27P01718 113 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 CD48P09326 243 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 IRF1P10914 325 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 GOT1P17174 413 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 GJA1P17302 382 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 TGM2P21980 687 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 CHRNA3P32297 505 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 NR2C2P49116 596 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 NRG1Q02297 640 aaPredicted RBP10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 ADAM15Q13444 863 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 KCNC3Q14003 757 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 TEAD2Q15562 447 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 CCNG2Q16589 344 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 ATAT1Q5SQI0 421 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 ANKRD54Q6NXT1 300 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 TMCO3Q6UWJ1 677 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 RFX8Q6ZV50 586 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 MAATS1Q7Z4T9 603 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 GPR149Q86SP6 731 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 CHSY1Q86X52 802 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 PYROXD2Q8N2H3 581 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 C12orf76Q8N812 135 aaPredicted RBP10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 SHKBP1Q8TBC3 707 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 ZNF707Q96C28 371 aaPredicted RBP10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 HAUS1Q96CS2 278 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 TBC1D31Q96DN5 1066 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 FERMT1Q9BQL6 677 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 SLC46A2Q9BY10 475 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 GKN1Q9NS71 199 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 MTMR10Q9NXD2 777 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 SMARCAL1Q9NZC9 954 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 PATJQ8NI35 1801 aa10.81□□□□□ -0.68
TMEM55B-205ENST00000554028 CEP290O15078 2479 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TYW5A2RUC4 315 aaKnown RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 E9PAM4 449 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 F5H5T6 163 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 APOC4-APOC2K7ER74 178 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 MCF2LO15068 1137 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 PHF2O75151 1096 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 ZNF189O75820 626 aaPredicted RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 STC2O76061 302 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 LRIG2O94898 1065 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 PAPLNO95428 1278 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 OLFM2O95897 454 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 APOC2P02655 101 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 POU3F3P20264 500 aaPredicted RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 AMPD1P23109 780 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 FSHRP23945 695 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 IL4RP24394 825 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 CORO1AP31146 461 aaKnown RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 SERPINB6P35237 376 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 KCNQ1P51787 676 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 NTHL1P78549 312 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 C2orf54Q08AI8 447 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 KLF1Q13351 362 aaPredicted RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 GRIN2CQ14957 1233 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 GLE1Q53GS7 698 aaKnown RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 MS4A13Q5J8X5 152 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TEX35Q5T0J7 233 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 ADGRF1Q5T601 910 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 DENND1CQ8IV53 801 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 CCDC117Q8IWD4 279 aaPredicted RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 KLHL7Q8IXQ5 586 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 CCDC105Q8IYK2 499 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 MMGT1Q8N4V1 131 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 LZTR1Q8N653 840 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TTC16Q8NEE8 873 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 PCDH19Q8TAB3 1148 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 GRK7Q8WTQ7 553 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TSC1Q92574 1164 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 FAF2Q96CS3 445 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 RIPOR3Q96MK2 946 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 KRT12Q99456 494 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 RETREG1Q9H6L5 497 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TMPRSS4Q9NRS4 437 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 RBM12Q9NTZ6 932 aaKnown RBP10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 TDP1Q9NUW8 608 aa10.8□□□□□ -0.68
TMEM55B-205ENST00000554028 PPARGC1AQ9UBK2 798 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms