RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 GBP6Q6ZN66 633 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 PAQR9Q6ZVX9 377 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 LUZP1Q86V48 1076 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 TMPRSS12Q86WS5 348 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 MARCH9Q86YJ5 346 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 ZCCHC9Q8N567 271 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 EHBP1Q8NDI1 1231 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 LMO3Q8TAP4 145 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 SEMA4DQ92854 862 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 FBXO32Q969P5 355 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 FAM81BQ96LP2 452 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 NT5C1BQ96P26 610 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 MMS19Q96T76 1030 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 MRPL45Q9BRJ2 306 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 GPR174Q9BXC1 333 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 B3GNT5Q9BYG0 378 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF518BQ9C0D4 1074 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 MKRN2Q9H000 416 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 INTS2Q9H0H0 1204 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 PRDM16Q9HAZ2 1276 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 APOBEC3GQ9HC16 384 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 DNAJC17Q9NVM6 304 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 TAB2Q9NYJ8 693 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 THAP10Q9P2Z0 257 aaPredicted RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 NXF1Q9UBU9 619 aaKnown RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 CHORDC1Q9UHD1 332 aaPredicted RBP8.11□□□□□ -1.11
ABCD4-220ENST00000553998 BTBD3Q9Y2F9 522 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 SLC27A6Q9Y2P4 619 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 DAAM1Q9Y4D1 1078 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 RAI2Q9Y5P3 530 aa8.11□□□□□ -1.11
ABCD4-220ENST00000553998 MYO18AQ92614 2054 aaKnown RBP8.1□□□□□ -1.11
ABCD4-220ENST00000553998 MEI4A8MW99 385 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 CLSTN1O94985 981 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ATP1A3P13637 1013 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 HLA-EP13747 358 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ASPAP45381 313 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 DGKGP49619 791 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 AFF3P51826 1226 aaKnown RBP8.1□□□□□ -1.11
ABCD4-220ENST00000553998 COPAP53621 1224 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 YWHAEP62258 255 aaKnown RBP8.1□□□□□ -1.11
ABCD4-220ENST00000553998 GCNT1Q02742 428 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 FILIP1LQ4L180 1135 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 KLHDC10Q6PID8 442 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ENOSF1Q7L5Y1 443 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 APTXQ7Z2E3 356 aaKnown RBP8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF605Q86T29 641 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 UNC93AQ86WB7 457 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 TMPRSS6Q8IU80 811 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF843Q8N446 348 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 ZNF276Q8N554 614 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
ABCD4-220ENST00000553998 B3GALNT2Q8NCR0 500 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 SCAMP5Q8TAC9 235 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 JAKMIP2Q96AA8 810 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 P2RY11Q96G91 374 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 KCNK16Q96T55 309 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 NUP58Q9BVL2 599 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 BBS2Q9BXC9 721 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 VPS16Q9H269 839 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 SNX25Q9H3E2 840 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 DPEP3Q9H4B8 488 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 CYLDQ9NQC7 956 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 PCDHGA1Q9Y5H4 931 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 STON1Q9Y6Q2 735 aa8.1□□□□□ -1.11
ABCD4-220ENST00000553998 A0A1B0GTH6 734 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 A0A1B0GVT2 93 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CYSRT1A8MQ03 144 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 NEDD8-MDP1E9PL57 170 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CLDN5O00501 218 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 SERPINC1P01008 464 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PENKP01210 267 aaPredicted RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 C1SP09871 688 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CDK4P11802 303 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 TRIM21P19474 475 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PON1P27169 355 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 ITPKBP27987 946 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 GRK6P43250 576 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 GRIA4P48058 902 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CSNK1EP49674 416 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PGFP49763 221 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 SLC5A3P53794 718 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 INCA1Q0VD86 236 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 ORC1Q13415 861 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CUL2Q13617 745 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 STARD3Q14849 445 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 RTP5Q14D33 572 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 E2F5Q15329 346 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 KIF19Q2TAC6 998 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 SPOPLQ6IQ16 392 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 TRIM65Q6PJ69 517 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 PCSK4Q6UW60 755 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 KIAA1324Q6UXG2 1013 aaKnown RBP8.09□□□□□ -1.11
ABCD4-220ENST00000553998 Q6ZNB5 142 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 OR6B3Q8NGW1 331 aa8.09□□□□□ -1.11
ABCD4-220ENST00000553998 IGSF8Q969P0 613 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms