RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCDC112Q8NEF3 446 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 TAS1R2Q8TE23 839 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 DDI1Q8WTU0 396 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 SIPA1Q96FS4 1042 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 DUSP16Q9BY84 665 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 DCLK3Q9C098 648 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 ZDHHC5Q9C0B5 715 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 GOLPH3LQ9H4A5 285 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 APOBEC3GQ9HC16 384 aaKnown RBP9.25□□□□□ -0.93
TDP1-208ENST00000553989 MARCH2Q9P0N8 246 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 MAPK8IP1Q9UQF2 711 aa9.25□□□□□ -0.93
TDP1-208ENST00000553989 APOBEC2Q9Y235 224 aaKnown RBP9.25□□□□□ -0.93
TDP1-208ENST00000553989 PCDH15Q96QU1 1955 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 A0A1B0GVL5 298 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 BCAT2O15382 392 aaPredicted RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 CER1O95813 267 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 PENKP01210 267 aaPredicted RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 KLKB1P03952 638 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 MYL1P05976 194 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 PFKFB1P16118 471 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 RPL13P26373 211 aaKnown RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 OXTRP30559 389 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 SYKP43405 635 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 TPMTP51580 245 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 NDUFA8P51970 172 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 ZNF234Q14588 700 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 FYB2Q5VWT5 728 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 RAB44Q7Z6P3 723 aaPredicted RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 SCD5Q86SK9 330 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 KIF18AQ8NI77 898 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 ANKRD7Q92527 254 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 MKRN2Q9H000 416 aaKnown RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 GAREM1Q9H706 876 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 CD248Q9HCU0 757 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 WSB2Q9NYS7 404 aaPredicted RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 CLIC5Q9NZA1 410 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 USP36Q9P275 1121 aaKnown RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 THAP10Q9P2Z0 257 aaPredicted RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 DACH1Q9UI36 760 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 AGO1Q9UL18 857 aaKnown RBP9.24□□□□□ -0.93
TDP1-208ENST00000553989 SLC27A6Q9Y2P4 619 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 CHD6Q8TD26 2715 aa9.24□□□□□ -0.93
TDP1-208ENST00000553989 GOLGA8CPA6NN73 597 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 MAPK13O15264 365 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 HOXB3P14651 431 aaPredicted RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 PRKCHP24723 683 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 PSMC2P35998 433 aaKnown RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 MATKP42679 507 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 HARS2P49590 506 aaKnown RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 MXI1P50539 228 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 ZNF132P52740 706 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 YWHAGP61981 247 aaKnown RBP eCLIP9.23□□□□□ -0.93
TDP1-208ENST00000553989 PPP3CAQ08209 521 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 SCAPQ12770 1279 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 ADAM9Q13443 819 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 EIF4HQ15056 248 aaKnown RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 FNDC3BQ53EP0 1204 aaKnown RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 C1orf220Q5T0J3 134 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 KRT39Q6A163 491 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 IL27RAQ6UWB1 636 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 C11orf57Q6ZUT1 292 aaPredicted RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 PIGZQ86VD9 579 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 PROSER1Q86XN7 944 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 CADM4Q8NFZ8 388 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 RNF139Q8WU17 664 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 TMEM174Q8WUU8 243 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 ADAMTS14Q8WXS8 1223 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 SORCS1Q8WY21 1168 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 PLD4Q96BZ4 506 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 NUP58Q9BVL2 599 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 LRRC4Q9HBW1 653 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 TMEM8AQ9HCN3 771 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 ITM2CQ9NQX7 267 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 ELOVL2Q9NXB9 296 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 EIF2B4Q9UI10 523 aaKnown RBP9.23□□□□□ -0.93
TDP1-208ENST00000553989 FBXO10Q9UK96 956 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 TRAF3IP3Q9Y228 551 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 USP3Q9Y6I4 520 aa9.23□□□□□ -0.93
TDP1-208ENST00000553989 PCNX2A6NKB5 2137 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 METTL12A8MUP2 240 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 KCNJ18B7U540 433 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TSPAN3O60637 253 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 GJB3O75712 270 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 NUDT7P0C024 238 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 EPB41P11171 864 aaKnown RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 HLA-EP13747 358 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TKTL1P51854 596 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 PRSS12P56730 875 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 ACAP1Q15027 740 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TEAD4Q15561 434 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 GOLGA7BQ2TAP0 167 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 HLA-BQ31612 363 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 DCAF17Q5H9S7 520 aaPredicted RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 TCERG1LQ5VWI1 586 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 C19orf48Q6RUI8 117 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 ADAT2Q7Z6V5 191 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms