RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GAB1Q13480 694 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 CLCA4Q14CN2 919 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 KRT71Q3SY84 523 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 NXNQ6DKJ4 435 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 PRSS57Q6UWY2 283 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 SRGAP1Q7Z6B7 1085 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 MORC1Q86VD1 984 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 SPICE1Q8N0Z3 855 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 NME8Q8N427 588 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.72□□□□□ -1.97
SRP54-204ENST00000553923 ARL14EPQ8N8R7 260 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 ANKRD42Q8N9B4 389 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 IL31RAQ8NI17 732 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 PARD3BQ8TEW8 1205 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 EME1Q96AY2 570 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 URB1-AS1Q96HZ7 61 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 WDR83Q9BRX9 315 aaKnown RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 SF3B5Q9BWJ5 86 aaKnown RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 RHOBTB2Q9BYZ6 727 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 ZHX3Q9H4I2 956 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 NMRK2Q9NPI5 230 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 DKK4Q9UBT3 224 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 FBXO9Q9UK97 447 aaPredicted RBP2.72□□□□□ -1.97
SRP54-204ENST00000553923 SLC27A6Q9Y2P4 619 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 COL15A1P39059 1388 aa2.72□□□□□ -1.97
SRP54-204ENST00000553923 TRIM43BA6NCK2 446 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 H0YGN5 161 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PYCARD-AS1I3L0S3 204 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PRYO14603 147 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 APAF1O14727 1248 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 TCEA3O75764 348 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PIAS2O75928 621 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 IFNA2P01563 188 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 WNT1P04628 370 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 UMODP07911 640 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 HOXC6P09630 235 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 U2AF1L5P0DN76 240 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 TCEA1P23193 301 aaKnown RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 ZNF84P51523 738 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 ITGA8P53708 1063 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 U2AF1Q01081 240 aaKnown RBP eCLIP2.71□□□□□ -1.98
SRP54-204ENST00000553923 ARHGEF7Q14155 803 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PGM5Q15124 567 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 DLGAP5Q15398 846 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 MINDY4Q4G0A6 757 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 C1orf228Q6PIY5 440 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 SKAP1Q86WV1 359 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 ZNF354CQ86Y25 554 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 ADGRF4Q8IZF3 695 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 CPXCR1Q8N123 301 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 TMTC2Q8N394 836 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PPP1R35Q8TAP8 253 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 CELF1Q92879 486 aaKnown RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 TRIM43Q96BQ3 446 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 ZDHHC12Q96GR4 267 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 SLC39A13Q96H72 371 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 VPS50Q96JG6 964 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 SELENOOQ9BVL4 669 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 CINPQ9BW66 212 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 ZNF700Q9H0M5 742 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PRDM11Q9NQV5 511 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 STK32BQ9NY57 414 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PLK2Q9NYY3 685 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 KCNG2Q9UJ96 466 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PNMA8BQ9ULN7 279 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 ICAM5Q9UMF0 924 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 PAXBP1Q9Y5B6 917 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 INSL5Q9Y5Q6 135 aa2.71□□□□□ -1.98
SRP54-204ENST00000553923 HEMK1Q9Y5R4 338 aaPredicted RBP2.71□□□□□ -1.98
SRP54-204ENST00000553923 USP19O94966 1318 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 FRMPD2Q68DX3 1309 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 ZNF335Q9H4Z2 1342 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 RPS10-NUDT3A0A1W2PQS6 291 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 PHGDHO43175 533 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 NBNO60934 754 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 MYBP10242 640 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 TRIM27P14373 513 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 PTMSP20962 102 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 KLRC1P26715 233 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 HOXD12P35452 270 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 COMPP49747 757 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 ERVFC1-1P60608 527 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 RAE1P78406 368 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 SETQ01105 290 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 CHAF1AQ13111 956 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 STK3Q13188 491 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 MORC3Q14149 939 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 GRM3Q14832 879 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 CXorf57Q6NSI4 855 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 SWSAP1Q6NVH7 229 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 CLEC4GQ6UXB4 293 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 CLEC9AQ6UXN8 241 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 SMAP1Q8IYB5 467 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 ENAHQ8N8S7 591 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 PRR26Q8N8Z3 221 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 PJA1Q8NG27 643 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 TMEM174Q8WUU8 243 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 GJA10Q969M2 543 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 ZNF668Q96K58 619 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms