RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 WASP42768 502 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SGSHP51688 502 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 CDR2Q01850 454 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 IQCB1Q15051 598 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 EIF4HQ15056 248 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 USP39Q53GS9 565 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 NADSYN1Q6IA69 706 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 FAM160A2Q8N612 972 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 MSANTD4Q8NCY6 345 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC20A1Q8WUM9 679 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 UCMAQ8WVF2 138 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 CPA5Q8WXQ8 436 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 BTN2A3PQ96KV6 586 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 GABRG3Q99928 467 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 TPSD1Q9BZJ3 242 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 DDIT4Q9NX09 232 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 ELOVL2Q9NXB9 296 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SLC12A6Q9UHW9 1150 aa10.6□□□□□ -0.71
HNRNPC-208ENST00000553753 SYNJ2BP-COX16A0A087WUM0 186 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 A0A1W2PQF6 199 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TCRBV21S2A2A0A5A6 115 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 KCNU1A8MYU2 1149 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 WASH3PC4AMC7 463 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 NPC1O15118 1278 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TEX33O43247 280 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TIMM44O43615 452 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TBL1XO60907 577 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 RETP07949 1114 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 ABCB4P21439 1286 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 CCR1P32246 355 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 MATKP42679 507 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 RNASE9P60153 205 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 NOMO3P69849 1222 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 FMO1Q01740 532 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 ARID5AQ03989 594 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 E2F5Q15329 346 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 C2CD6Q53TS8 623 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 NAA35Q5VZE5 725 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 TMEM215Q68D42 235 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 RNF43Q68DV7 783 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 KBTBD6Q86V97 674 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 XYLT1Q86Y38 959 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 KIAA2013Q8IYS2 634 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 PGBD3Q8N328 593 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 ATP6V0D2Q8N8Y2 350 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 ZNF557Q8N988 423 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 HMGB4Q8WW32 186 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 RNF34Q969K3 372 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 ZC3H10Q96K80 434 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 CIPCQ9C0C6 399 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 CACNA2D2Q9NY47 1150 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 RRN3Q9NYV6 651 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 COX16Q9P0S2 106 aa10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 THAP10Q9P2Z0 257 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 XPO7Q9UIA9 1087 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-208ENST00000553753 FAM170AA1A519 330 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 M0QYT0 321 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 DCLK1O15075 740 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 ZBTB24O43167 697 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 DAB1O75553 588 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 CYP1A1P04798 512 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 CHRNB2P17787 502 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 SCNN1AP37088 669 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 RPS24P62847 133 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 NME3Q13232 169 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 FAM102AQ5T9C2 384 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 HJURPQ8NCD3 748 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 OLIG1Q8TAK6 271 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 MYEOVQ96EZ4 313 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 LOXL4Q96JB6 756 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 PRICKLE1Q96MT3 831 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 CD248Q9HCU0 757 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 ABCB8Q9NUT2 735 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 STIM2Q9P246 746 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 GGA2Q9UJY4 613 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 STAP1Q9ULZ2 295 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 INVSQ9Y283 1065 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 STON1Q9Y6Q2 735 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 ABCA7Q8IZY2 2146 aa10.58□□□□□ -0.72
HNRNPC-208ENST00000553753 CAVIN2O95810 425 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 PABPC1P11940 636 aaKnown RBP10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 GABRG2P18507 467 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 MMP8P22894 467 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 IL12RB1P42701 662 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 MTA1Q13330 715 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 ENPP2Q13822 863 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 ELF2Q15723 593 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 SKOR2Q2VWA4 1001 aaPredicted RBP10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 PLK5Q496M5 336 aa10.57□□□□□ -0.72
HNRNPC-208ENST00000553753 RAP1GAP2Q684P5 730 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms