RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 OR4N4Q8N0Y3 316 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 SAMD3Q8N6K7 520 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 NANOGP1Q8N7R0 232 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 FAM71BQ8TC56 605 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
VRK1-202ENST00000553683 ZFPM2Q8WW38 1151 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 NPIPB3Q92617 1050 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 FSCN3Q9NQT6 498 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 PAPOLBQ9NRJ5 636 aaKnown RBP3.79□□□□□ -1.8
VRK1-202ENST00000553683 MTMR4Q9NYA4 1195 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 ZBTB1Q9Y2K1 713 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 LRCH1Q9Y2L9 728 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 AFG3L2Q9Y4W6 797 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 PCDHB2Q9Y5E7 798 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 PCDHGB2Q9Y5G2 931 aa3.79□□□□□ -1.8
VRK1-202ENST00000553683 F8W810 466 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 TLX3O43711 291 aaPredicted RBP3.78□□□□□ -1.8
VRK1-202ENST00000553683 LARGE1O95461 756 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 BMP15O95972 392 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 AKR1A1P14550 325 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 ABCB4P21439 1286 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 STAT6P42226 847 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 CPA2P48052 419 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 VPS41P49754 854 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 ZNF91Q05481 1191 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 GAB1Q13480 694 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 UBE4AQ14139 1066 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 STARD3Q14849 445 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 AAK1Q2M2I8 961 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 P3H1Q32P28 736 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 ARFGAP1Q8N6T3 406 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 IGFBPL1Q8WX77 278 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 MUL1Q969V5 352 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 VCPIP1Q96JH7 1222 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 CLMNQ96JQ2 1002 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 NPAS1Q99742 590 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 WDR12Q9GZL7 423 aaKnown RBP3.78□□□□□ -1.8
VRK1-202ENST00000553683 SFXN1Q9H9B4 322 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 FNIP2Q9P278 1114 aa3.78□□□□□ -1.8
VRK1-202ENST00000553683 CYP3A7-CYP3A51PA0A087WV96 503 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 EFCAB8A8MWE9 144 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 M0QZQ0 153 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 PPP6R2O75170 966 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 ALADP13716 330 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 PRF1P14222 555 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 TGM2P21980 687 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 CYP3A7P24462 503 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 YY1P25490 414 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 HOXD9P28356 352 aaPredicted RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 ME1P48163 572 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 TNFAIP2Q03169 654 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 MAPK7Q13164 816 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 MORC3Q14149 939 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 SPARCL1Q14515 664 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 RABEP1Q15276 862 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 TBRG1Q3YBR2 411 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 ISM2Q6H9L7 571 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 C16orf89Q6UX73 402 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 SLC39A5Q6ZMH5 540 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 OR52N4Q8NGI2 321 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 SLC22A17Q8WUG5 538 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 TRMT61AQ96FX7 289 aaKnown RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 PRPF18Q99633 342 aaKnown RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 ELOVL1Q9BW60 279 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 SPRTNQ9H040 489 aaPredicted RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 MLXIPQ9HAP2 919 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 IGSF9Q9P2J2 1179 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 IPO11Q9UI26 975 aaKnown RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 AGO2Q9UKV8 859 aaKnown RBP3.77□□□□□ -1.81
VRK1-202ENST00000553683 VPS4AQ9UN37 437 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 HS3ST3B1Q9Y662 390 aa3.77□□□□□ -1.81
VRK1-202ENST00000553683 CCDC194A0A1B0GVG4 234 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 ABHD14A-ACY1A0A1B0GW23 586 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 SLC22A23A1A5C7 686 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 MYMKA6NI61 221 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 SYT5O00445 386 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 PIP5K1BO14986 540 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 KCNAB3O43448 404 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 TULP3O75386 442 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 SKAP2O75563 359 aaPredicted RBP3.76□□□□□ -1.81
VRK1-202ENST00000553683 OAZ2O95190 189 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 CER1O95813 267 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 ALDOAP04075 364 aaKnown RBP3.76□□□□□ -1.81
VRK1-202ENST00000553683 RFPL3SP0C7P2 107 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 RBM6P78332 1123 aaKnown RBP3.76□□□□□ -1.81
VRK1-202ENST00000553683 MTA1Q13330 715 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 GRM4Q14833 912 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 KRT72Q14CN4 511 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 ANXA2RQ3ZCQ2 193 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 EPHA10Q5JZY3 1008 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 RINT1Q6NUQ1 792 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 ERAP2Q6P179 960 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 MORC1Q86VD1 984 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.76□□□□□ -1.81
VRK1-202ENST00000553683 PAQR4Q8N4S7 273 aaPredicted RBP3.76□□□□□ -1.81
VRK1-202ENST00000553683 ZNF527Q8NB42 609 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 SLC44A5Q8NCS7 719 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 PRDM16Q9HAZ2 1276 aa3.76□□□□□ -1.81
VRK1-202ENST00000553683 MLXIPLQ9NP71 852 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms