RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 MYO1FO00160 1098 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 TRDMT1O14717 391 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 TSPAN3O60637 253 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 PAGE1O75459 146 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 ENDOD1O94919 500 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 TACR2P21452 398 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 CD72P21854 359 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 EIF2DP41214 584 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 MAGEA1P43355 309 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 GSE1Q14687 1217 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 PON2Q15165 354 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 FAM133BQ5BKY9 247 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 TMEM31Q5JXX7 168 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 RABGAP1LQ5R372 815 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 NUDT18Q6ZVK8 323 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 BNIPLQ7Z465 357 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 LGI2Q8N0V4 545 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 NAT16Q8N8M0 369 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 CCDC112Q8NEF3 446 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 ZNF564Q8TBZ8 553 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 CENPIQ92674 756 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 ARHGEF26Q96DR7 871 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 EIF3CQ99613 913 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 PACSIN1Q9BY11 444 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 ADAM33Q9BZ11 813 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 FOXQ1Q9C009 403 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 SIK2Q9H0K1 926 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 LTB4R2Q9NPC1 389 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 DNAJC17Q9NVM6 304 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 DEC1Q9P2X7 70 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 IP6K2Q9UHH9 426 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 XPO7Q9UIA9 1087 aaKnown RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 LCMT1Q9UIC8 334 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-202ENST00000553656 BDP1A6H8Y1 2624 aa14.33□□□□□ -0.11
TUBB3-202ENST00000553656 FAM170BA6NMN3 283 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 CACNG3O60359 315 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 TBL1XO60907 577 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 NDUFA10O95299 355 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PENKP01210 267 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-202ENST00000553656 APODP05090 189 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 SLC6A4P31645 630 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 HDAC4P56524 1084 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 OGDHQ02218 1023 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 LRRC32Q14392 662 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PIGHQ14442 188 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-202ENST00000553656 MS4A13Q5J8X5 152 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 SH3PXD2AQ5TCZ1 1133 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 TTC39BQ5VTQ0 682 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-202ENST00000553656 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 TXNDC11Q6PKC3 985 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 LRRC31Q6UY01 552 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 BMP8AQ7Z5Y6 402 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 RHOT2Q8IXI1 618 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 TXLNBQ8N3L3 684 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PJA1Q8NG27 643 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 HAPLN3Q96S86 360 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PNKPQ96T60 521 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 ARHGEF4Q9NR80 690 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PLK2Q9NYY3 685 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 SIT1Q9Y3P8 196 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PCDHA13Q9Y5I0 950 aa14.33□□□□□ -0.12
TUBB3-202ENST00000553656 PRPSAP2O60256 369 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 TULP3O75386 442 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 LCA5LO95447 670 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 PDGFBP01127 241 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-202ENST00000553656 DRD1P21728 446 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 TARSP26639 723 aaKnown RBP14.32□□□□□ -0.12
TUBB3-202ENST00000553656 OPRD1P41143 372 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 DGKGP49619 791 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 GALK1P51570 392 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 CLCN5P51795 746 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 AIF1P55008 147 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 KRT83P78385 493 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 KDSRQ06136 332 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 CDH18Q13634 790 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 AUHQ13825 339 aaKnown RBP14.32□□□□□ -0.12
TUBB3-202ENST00000553656 ACAP1Q15027 740 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 GAB4Q2WGN9 574 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 EFHC2Q5JST6 749 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 DGKKQ5KSL6 1271 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 MPP7Q5T2T1 576 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 ASTLQ6HA08 431 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-202ENST00000553656 SLFN11Q7Z7L1 901 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 RFFLQ8WZ73 363 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 NTAN1Q96AB6 310 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 CHFRQ96EP1 664 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
TUBB3-202ENST00000553656 OSBPL6Q9BZF3 934 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 TRIM7Q9C029 511 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 STIM2Q9P246 746 aa14.32□□□□□ -0.12
TUBB3-202ENST00000553656 VANGL2Q9ULK5 521 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms