RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 RAP1GAP2Q684P5 730 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 MFSD7Q6UXD7 560 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 SPOCD1Q6ZMY3 1216 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 DDX42Q86XP3 938 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD8-204ENST00000553622 ARID3BQ8IVW6 561 aaPredicted RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 EXD1Q8NHP7 514 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 UBE2Q2Q8WVN8 375 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 PBKQ96KB5 322 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 MSLNLQ96KJ4 702 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 BTN2A3PQ96KV6 586 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 EPAS1Q99814 870 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 HEMGNQ9BXL5 484 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 DCLK3Q9C098 648 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 POMKQ9H5K3 350 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 UBE2ZQ9H832 354 aaPredicted RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 PCDH18Q9HCL0 1135 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 TDP1Q9NUW8 608 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 MTMR10Q9NXD2 777 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 OR12D3Q9UGF7 316 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 ZMYM5Q9UJ78 669 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 ARHGAP26Q9UNA1 814 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 CCL26Q9Y258 94 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 USP15Q9Y4E8 981 aaPredicted RBP10.11□□□□□ -0.79
CHD8-204ENST00000553622 HS3ST4Q9Y661 456 aa10.11□□□□□ -0.79
CHD8-204ENST00000553622 MYO18AQ92614 2054 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 TICRRQ7Z2Z1 1910 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 SOBPA7XYQ1 873 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 F5H5T6 163 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 I6L893 689 aaPredicted RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 TRDMT1O14717 391 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 ACSL4O60488 711 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 PAPLNO95428 1278 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 KRT10P13645 584 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 GOT1P17174 413 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 TACR2P21452 398 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 L1CAMP32004 1257 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 PAFAH1B1P43034 410 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 SCAPQ12770 1279 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 EIF4EBP2Q13542 120 aaPredicted RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 DPYSL3Q14195 570 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 DPYSL2Q16555 572 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 LONRF2Q1L5Z9 754 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 MS4A13Q5J8X5 152 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 FAM78AQ5JUQ0 283 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 PIK3R6Q5UE93 754 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 LRRC31Q6UY01 552 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 PSTKQ8IV42 348 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 LGI2Q8N0V4 545 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 SMRP1Q8NCR6 262 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 ZFRQ96KR1 1074 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 NECTIN4Q96NY8 510 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 HAPLN3Q96S86 360 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 MYADMQ96S97 322 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 DDX50Q9BQ39 737 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 CARD9Q9H257 536 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 RRAGDQ9NQL2 400 aaPredicted RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 GDE1Q9NZC3 331 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 SMARCAL1Q9NZC9 954 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 STIM2Q9P246 746 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 AGO1Q9UL18 857 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 CDH7Q9ULB5 785 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 VANGL2Q9ULK5 521 aa10.1□□□□□ -0.79
CHD8-204ENST00000553622 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
CHD8-204ENST00000553622 TCF20Q9UGU0 1960 aaKnown RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 E9PAM4 449 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 FAM72CH0Y354 149 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 PGRMC1O00264 195 aaKnown RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 TSPAN3O60637 253 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 FGGP02679 453 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 KLKB1P03952 638 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 PRLRP16471 622 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 AMPD1P23109 780 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 EPHB2P29323 1055 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 VIPR2P41587 438 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 CDKN2BP42772 138 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 COPS2P61201 443 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 ZXDBP98169 803 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 AMPD2Q01433 879 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 MTA1Q13330 715 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 AUHQ13825 339 aaKnown RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 COL19A1Q14993 1142 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 ANKRD20A8PQ5CZ79 823 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 TFDP3Q5H9I0 405 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 FAM72AQ5TYM5 149 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 NADSYN1Q6IA69 706 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 FAM72DQ6L9T8 149 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 C14orf80Q86SX3 495 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 FAM72BQ86X60 149 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 BBS7Q8IWZ6 715 aa10.09□□□□□ -0.79
CHD8-204ENST00000553622 CELF5Q8N6W0 485 aaKnown RBP10.09□□□□□ -0.79
CHD8-204ENST00000553622 ADAMTS19Q8TE59 1207 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms