RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 SRGAP2BP0DMP2 458 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 NQO1P15559 274 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 CALML3P27482 149 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 PRDX5P30044 214 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 LONP1P36776 959 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 AFMP43652 599 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 HAAOP46952 286 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CCR9P51686 369 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 AP3M2P53677 418 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CACNB3P54284 484 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SUMO1P63165 101 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 HTRA3P83110 453 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 IRF9Q00978 393 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 NIPAL4Q0D2K0 466 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 LSAMPQ13449 338 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 TAZQ16635 292 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 MYLK3Q32MK0 819 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ASPRV1Q53RT3 343 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ZC3H12BQ5HYM0 836 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 PPM1JQ5JR12 505 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CDKAL1Q5VV42 579 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 GADL1Q6ZQY3 521 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 C8orf86Q6ZUL3 223 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ERMP1Q7Z2K6 904 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CACNA2D4Q7Z3S7 1137 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SIAH1Q8IUQ4 282 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 DMRTC2Q8IXT2 367 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 KIF2BQ8N4N8 673 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CCDC197Q8NCU1 140 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ST13P5Q8NFI4 369 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 SLC5A5Q92911 643 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ARL8AQ96BM9 186 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 OLFM3Q96PB7 478 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CDADC1Q9BWV3 514 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SMARCAD1Q9H4L7 1026 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SCPEP1Q9HB40 452 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CD93Q9NPY3 652 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 HECAQ9UBI9 543 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 NAGPAQ9UK23 515 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 AGAP1Q9UPQ3 857 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 DAGLAQ9Y4D2 1042 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SLC12A7Q9Y666 1083 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 AP1M2Q9Y6Q5 423 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 EP400Q96L91 3159 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CNTNAP1P78357 1384 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 DNAJC25-GNG10A0A024R161 153 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ANKRD34BA5PLL1 514 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ARHGAP6O43182 974 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ARIH2O95376 493 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ZBED1O96006 694 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 TMEM253P0C7T8 217 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SPATA31D3P0C874 917 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ITGA4P13612 1032 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CIITAP33076 1130 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SHMT1P34896 483 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ACADSBP45954 432 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ALDH5A1P51649 535 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 STAT2P52630 851 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 THOP1P52888 689 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CD83Q01151 205 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ROR1Q01973 937 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 R3HDM1Q15032 1099 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 NOMO1Q15155 1222 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 GRIK5Q16478 980 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SMU1Q2TAY7 513 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 XKR5Q6UX68 686 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SPATA31D4Q6ZUB0 917 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 C11orf57Q6ZUT1 292 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 DYMQ7RTS9 669 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 KRT26Q7Z3Y9 468 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 GALNTL5Q7Z4T8 443 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CAND1Q86VP6 1230 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 SLC38A6Q8IZM9 456 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SYNPOQ8N3V7 929 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 RIBC1Q8N443 379 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 RBM14Q96PK6 669 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 EYA3Q99504 573 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SH3GL2Q99962 352 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SELENOSQ9BQE4 189 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CHCHD6Q9BRQ6 235 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 SPATA16Q9BXB7 569 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ADNPQ9H2P0 1102 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 EMC7Q9NPA0 242 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 PRDM6Q9NQX0 595 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 MTMR4Q9NYA4 1195 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 TRIM10Q9UDY6 481 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 TRIM33Q9UPN9 1127 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 PCDHGB5Q9Y5G0 923 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CLIC4Q9Y696 253 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ABHD14A-ACY1A0A1B0GW23 586 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 E2F8A0AVK6 867 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ZBTB42B2RXF5 422 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 H7C0C1 242 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 B4GALT4O60513 344 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 CCNT1O60563 726 aaKnown RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 CBFA2T3O75081 653 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 TNFRSF6BO95407 300 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 ZBTB11O95625 1053 aaPredicted RBP4.16□□□□□ -1.74
RDH11-204ENST00000553578 SPATA31C1P0DKV0 1188 aa4.16□□□□□ -1.74
RDH11-204ENST00000553578 VAV1P15498 845 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms