RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 WARSP23381 471 aaKnown RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CD68P34810 354 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 RDXP35241 583 aaKnown RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 DDIT3P35638 169 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 GRIK1P39086 918 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 PPP3CCP48454 512 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 TAF10Q12962 218 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 GRIK2Q13002 908 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 POSTNQ15063 836 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 EGFLAMQ63HQ2 1017 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 DPH6Q7L8W6 267 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 TRMT11Q7Z4G4 463 aaKnown RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 VN1R5Q7Z5H4 357 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 SLCO6A1Q86UG4 719 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 DDX42Q86XP3 938 aaKnown RBP eCLIP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CSGALNACT2Q8N6G5 542 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 PNPLA1Q8N8W4 532 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 TRIML1Q8N9V2 468 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 OR5B17Q8NGF7 314 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 MYCBPAPQ8TBZ2 947 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 WBP2Q969T9 261 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 OTUB2Q96DC9 234 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 KLHDC7BQ96G42 594 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CALML4Q96GE6 196 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 ZNF419Q96HQ0 510 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 C8orf48Q96LL4 319 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 ZSCAN31Q96LW9 406 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 ACOX2Q99424 681 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 KIF2CQ99661 725 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 GABRG3Q99928 467 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CBWD1Q9BRT8 395 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 FGFBP2Q9BYJ0 223 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 RBCK1Q9BYM8 510 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 PDE11AQ9HCR9 933 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 OSGEPQ9NPF4 335 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CACNA2D2Q9NY47 1150 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 MAGEC2Q9UBF1 373 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-219ENST00000553488 PCOLCE2Q9UKZ9 415 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 CYP8B1Q9UNU6 501 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 RAXQ9Y2V3 346 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 MYLKQ15746 1914 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 MYO18BQ8IUG5 2567 aa7.73□□□□□ -1.17
ATXN3-219ENST00000553488 BSNQ9UPA5 3926 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 GOLGA8IPA6NC78 632 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 GOLGA8JA6NMD2 632 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 COCHO43405 550 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 GREM1O60565 184 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ZNF217O75362 1048 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ALX3O95076 343 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 SYPP08247 313 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 KRT19P08727 400 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 TMEM191BP0C7N4 346 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 MBL2P11226 248 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 GARTP22102 1010 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ANXA13P27216 316 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 NTSR1P30989 418 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 UBA7P41226 1012 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 RBP5P82980 135 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 CYP27A1Q02318 531 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 GAD2Q05329 585 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 MAPRE1Q15691 268 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 PLEKHG6Q3KR16 790 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 MDH1BQ5I0G3 518 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 C10orf76Q5T2E6 689 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 MCTP1Q6DN14 999 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 TOGARAM2Q6ZUX3 1019 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 BBS7Q8IWZ6 715 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 IPO4Q8TEX9 1081 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 CACTINQ8WUQ7 758 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 FOXD4L4Q8WXT5 416 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ALKBH8Q96BT7 664 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 DNAJC19Q96DA6 116 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 MRPL45Q9BRJ2 306 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 TRIM9Q9C026 710 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ZNF518BQ9C0D4 1074 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 SLC6A17Q9H1V8 727 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 DPEP3Q9H4B8 488 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 OLFML3Q9NRN5 406 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 INTS13Q9NVM9 706 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 EHD2Q9NZN4 543 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 TBC1D14Q9P2M4 693 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 SEL1LQ9UBV2 794 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 SUSD2Q9UGT4 822 aa7.72□□□□□ -1.17
ATXN3-219ENST00000553488 ARID1BQ8NFD5 2236 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 NYNRINQ9P2P1 1898 aaKnown RBP7.72□□□□□ -1.17
ATXN3-219ENST00000553488 COL5A1P20908 1838 aaPredicted RBP7.71□□□□□ -1.17
ATXN3-219ENST00000553488 PLXNA2O75051 1894 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 A0A1W2PP55 124 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 FRMD3A2A2Y4 597 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TBC1D3BA6NDS4 549 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 PRRT4C9JH25 899 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 CACNG3O60359 315 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 LDHAP00338 332 aaKnown RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 PDGFRBP09619 1106 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 ZDHHC11BP0C7U3 371 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 ZNF883P0CG24 379 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 LONP1P36776 959 aaKnown RBP7.71□□□□□ -1.18
ATXN3-219ENST00000553488 WASP42768 502 aa7.71□□□□□ -1.18
ATXN3-219ENST00000553488 TUBP50607 506 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms