RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LMO2P25791 158 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 LILRA4P59901 499 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 MRPS5P82675 430 aaKnown RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 PAFAH1B3Q15102 231 aaKnown RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 TBCCQ15814 346 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 MTDHQ86UE4 582 aaKnown RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 GIMAP7Q8NHV1 300 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 CLEC4CQ8WTT0 213 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 ATP2A3Q93084 1043 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 NTAN1Q96AB6 310 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 SKA1Q96BD8 255 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 RSRC1Q96IZ7 334 aaKnown RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 SLC2A13Q96QE2 648 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 NPY6RQ99463 290 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 KLF6Q99612 283 aaPredicted RBP13.31□□□□□ -0.28
SHMT2-205ENST00000553474 TBC1D10AQ9BXI6 508 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 CXCL16Q9H2A7 254 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 HES2Q9Y543 173 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
SHMT2-205ENST00000553474 C9IYK1 514 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 GABRDO14764 452 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 SPTLC1O15269 473 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 MTSS1O43312 755 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 GOT1P17174 413 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 PGAM1P18669 254 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TFE3P19532 575 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 AKAP5P24588 427 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 HCAR3P49019 387 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 PSEN2P49810 448 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 SULT1E1P49888 294 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 GJA9P57773 515 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TMEM62Q0P6H9 643 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 SCAPQ12770 1279 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 MTM1Q13496 603 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 E2F5Q15329 346 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 FAXCQ5TGI0 409 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TLK2Q86UE8 772 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 DEFB106AQ8N104 65 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TMEM86AQ8N2M4 240 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 CCDC185Q8N715 623 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 RNF139Q8WU17 664 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 DEPDC1BQ8WUY9 529 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 UTP4Q969X6 686 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 E2F7Q96AV8 911 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 MMADHCQ9H3L0 296 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 KCNK13Q9HB14 408 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 IGSF9Q9P2J2 1179 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 C15orf41Q9Y2V0 281 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 A0A0G2JND7 137 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 ERI2A8K979 691 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 CXorf49A8MYA2 514 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 PIAS1O75925 651 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 ANP32DO95626 131 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 CYBAP13498 195 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 HOXC8P31273 242 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 ADIGQ0VDE8 80 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 FRG1Q14331 258 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 INSCQ1MX18 579 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TAF2Q6P1X5 1199 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 SIX6OS1Q8N1H7 587 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 RFWD2Q8NHY2 731 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 DNAJB3Q8WWF6 145 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 WNT8BQ93098 351 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 FAM149B1Q96BN6 582 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 THOC1Q96FV9 657 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 OXNAD1Q96HP4 312 aaPredicted RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 BTBD10Q9BSF8 475 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TMEM120AQ9BXJ8 343 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 WWP1Q9H0M0 922 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 FAM96AQ9H5X1 160 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 STN1Q9H668 368 aaKnown RBP13.3□□□□□ -0.28
SHMT2-205ENST00000553474 LRRC4Q9HBW1 653 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 SORCS3Q9UPU3 1222 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 IPPQ9Y573 584 aa13.3□□□□□ -0.28
SHMT2-205ENST00000553474 TRIP12Q14669 1992 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 AP3B1O00203 1094 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 HGSO14964 777 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 ADCY6O43306 1168 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 RPLP2P05387 115 aaKnown RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 ZNF865P0CJ78 1059 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 CSH1P0DML2 217 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 CSH2P0DML3 217 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms