RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 ATP6V1DQ9Y5K8 247 aa10.37□□□□□ -0.75
ACTN1-208ENST00000553370 FREM2Q5SZK8 3169 aa10.37□□□□□ -0.75
ACTN1-208ENST00000553370 TDRD6O60522 2096 aaKnown RBP10.37□□□□□ -0.75
ACTN1-208ENST00000553370 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
ACTN1-208ENST00000553370 TYW5A2RUC4 315 aaKnown RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 GOLGA6L4A6NEF3 574 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 SRRM3A6NNA2 597 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 SH3BP5O60239 455 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 GREM1O60565 184 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TSPAN3O60637 253 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 RHOBTB3O94955 611 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ZBED1O96006 694 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 PENKP01210 267 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 CISD3P0C7P0 127 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 FTH1P19P0C7X4 201 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 MATKP42679 507 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TPMTP51580 245 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 NDUFA8P51970 172 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 BCAT1P54687 386 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ADIGQ0VDE8 80 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ZNF234Q14588 700 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TEAD4Q15561 434 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TTC31Q49AM3 519 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 MPPE1Q53F39 396 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 SGO2Q562F6 1265 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 C1orf220Q5T0J3 134 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 FYB2Q5VWT5 728 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 IL27RAQ6UWB1 636 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 LYPD8Q6UX82 237 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ADAT2Q7Z6V5 191 aaKnown RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TMPRSS6Q8IU80 811 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 FMNL3Q8IVF7 1028 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 CCDC117Q8IWD4 279 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 GUF1Q8N442 669 aaKnown RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ENGASEQ8NFI3 743 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 GANCQ8TET4 914 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 TMEM174Q8WUU8 243 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 GATA6Q92908 595 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 EEF2KMTQ96G04 330 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ZNF419Q96HQ0 510 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 CAMK1GQ96NX5 476 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 NUP58Q9BVL2 599 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 DNAAF2Q9NVR5 837 aaKnown RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 RMND1Q9NWS8 449 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 THAP10Q9P2Z0 257 aaPredicted RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 AGO1Q9UL18 857 aaKnown RBP10.36□□□□□ -0.75
ACTN1-208ENST00000553370 HCN2Q9UL51 889 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 PLA2G4CQ9UP65 541 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 WDFY3Q8IZQ1 3526 aa10.36□□□□□ -0.75
ACTN1-208ENST00000553370 SHROOM3Q8TF72 1996 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 MUC22E2RYF6 1773 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 GOLGA8CPA6NN73 597 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 BCAT2O15382 392 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 KLKB1P03952 638 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 DNTTP04053 509 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 PRKCHP24723 683 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 FAM193AP78312 1265 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 ENPEPQ07075 957 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 BST2Q10589 180 aaKnown RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 DPYDQ12882 1025 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 NFIL3Q16649 462 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 EDRF1Q3B7T1 1238 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 CCDC157Q569K6 752 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 KRBA2Q6ZNG9 492 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 ANKRD52Q8NB46 1076 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 WFIKKN2Q8TEU8 576 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 SORCS1Q8WY21 1168 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 EDEM1Q92611 657 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 SLC2A11Q9BYW1 496 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 ULBP1Q9BZM6 244 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 MKRN2Q9H000 416 aaKnown RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 LHX5Q9H2C1 402 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 GAREM1Q9H706 876 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 RAB20Q9NX57 234 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 WSB2Q9NYS7 404 aaPredicted RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 USP36Q9P275 1121 aaKnown RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 EIF2B4Q9UI10 523 aaKnown RBP10.35□□□□□ -0.75
ACTN1-208ENST00000553370 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 DOCK9Q9BZ29 2069 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 MYLKQ15746 1914 aa10.35□□□□□ -0.75
ACTN1-208ENST00000553370 BHMG1C9JSJ3 638 aaPredicted RBP10.34□□□□□ -0.75
ACTN1-208ENST00000553370 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
ACTN1-208ENST00000553370 TIMM44O43615 452 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ATP9BO43861 1147 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 HLA-EP13747 358 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 LCP1P13796 627 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 CD59P13987 128 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 AFF3P51826 1226 aaKnown RBP10.34□□□□□ -0.75
ACTN1-208ENST00000553370 RAD23BP54727 409 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ZNF445P59923 1031 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 LRMPQ12912 555 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 STIM1Q13586 685 aa10.34□□□□□ -0.75
ACTN1-208ENST00000553370 INAVAQ3KP66 663 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms