RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 WDTC1Q8N5D0 677 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 FRMD1Q8N878 549 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 HJURPQ8NCD3 748 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 DDX1Q92499 740 aaKnown RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 MRGPRX1Q96LB2 322 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 CPXM1Q96SM3 734 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 ASNSD1Q9NWL6 643 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-207ENST00000553290 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 CEP83Q9Y592 693 aa13.46□□□□□ -0.25
ACTN1-207ENST00000553290 CEP192Q8TEP8 1941 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 IGHV1OR15-9A0A0B4J2B8 117 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 GOLGA6L7A0A1B0GV03 622 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 DCDC2BA2VCK2 349 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 KHNYNO15037 678 aaKnown RBP13.45□□□□□ -0.26
ACTN1-207ENST00000553290 TBL1XO60907 577 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 TRUB2O95900 331 aaKnown RBP13.45□□□□□ -0.26
ACTN1-207ENST00000553290 APOEP02649 317 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 PABPC1P11940 636 aaKnown RBP13.45□□□□□ -0.26
ACTN1-207ENST00000553290 SGSHP51688 502 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 RPL6Q02878 288 aaKnown RBP13.45□□□□□ -0.26
ACTN1-207ENST00000553290 KCNMA1Q12791 1236 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 RAPGEF1Q13905 1077 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 FUT11Q495W5 492 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 STPG1Q5TH74 334 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 KLHDC7AQ5VTJ3 777 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 LYSMD4Q5XG99 296 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 NADSYN1Q6IA69 706 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 DPY19L2P1Q6NXN4 242 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 CHST9Q7L1S5 443 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 TAC4Q86UU9 113 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 SLC47A2Q86VL8 602 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 SYT12Q8IV01 421 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 ADAM32Q8TC27 787 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 GPT2Q8TD30 523 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 PIGKQ92643 395 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 RXFP3Q9NSD7 469 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 GGA2Q9UJY4 613 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 PLA2G4CQ9UP65 541 aa13.45□□□□□ -0.26
ACTN1-207ENST00000553290 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 MED19A0JLT2 244 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 HSF2BPO75031 334 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 MOCS2O96007 188 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 ATP5BP06576 529 aaKnown RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 EPHX1P07099 455 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 TPM2P07951 284 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SLC2A3P11169 496 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 HOXD12P35452 270 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 PTGER3P43115 390 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 CDK17Q00537 523 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 DRAP1Q14919 205 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 MS4A13Q5J8X5 152 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 TCEAL6Q6IPX3 200 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SASS6Q6UVJ0 657 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 KIAA1324Q6UXG2 1013 aaKnown RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 MFN1Q8IWA4 741 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 CCDC117Q8IWD4 279 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 ATP6V0D2Q8N8Y2 350 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 C1orf131Q8NDD1 294 aaKnown RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 FIBINQ8TAL6 211 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SORCS1Q8WY21 1168 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 TCEAL3Q969E4 200 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 ERLEC1Q96DZ1 483 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 BTN2A3PQ96KV6 586 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SLC2A13Q96QE2 648 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 EDEM2Q9BV94 578 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 STIM2Q9P246 746 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 TJP2Q9UDY2 1190 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 SLC12A6Q9UHW9 1150 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 EVLQ9UI08 416 aaPredicted RBP13.44□□□□□ -0.26
ACTN1-207ENST00000553290 CYP8B1Q9UNU6 501 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 FHOD1Q9Y613 1164 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 CKAP5Q14008 2032 aa13.44□□□□□ -0.26
ACTN1-207ENST00000553290 LNP1A1A4G5 178 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 NDUFS2O75306 463 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 DLDP09622 509 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PNMA6AP0CW24 399 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 UCHL3P15374 230 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 POLR2EP19388 210 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 PRKCHP24723 683 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 MTA1Q13330 715 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 EIF4EBP2Q13542 120 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 TAF5Q15542 800 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 FNDC3BQ53EP0 1204 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ZC3H12AQ5D1E8 599 aaKnown RBP13.43□□□□□ -0.26
ACTN1-207ENST00000553290 CDKAL1Q5VV42 579 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 MBLAC2Q68D91 279 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 OR6B2Q6IFH4 312 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ARMCX6Q7L4S7 300 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 RABEPKQ7Z6M1 372 aa13.43□□□□□ -0.26
ACTN1-207ENST00000553290 ADIPOR2Q86V24 386 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms