RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ABCB4P21439 1286 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 ACP1P24666 158 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 EPHA8P29322 1005 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 HOXD13P35453 343 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 PCBP4P57723 403 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 MYL6P60660 151 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 PDE4CQ08493 712 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 BROXQ5VW32 411 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 KIAA0907Q7Z7F0 614 aaPredicted RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 FAM217AQ8IXS0 508 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 CPXM2Q8N436 756 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 SLC6A18Q96N87 628 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 ANP32EQ9BTT0 268 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 SMYD3Q9H7B4 428 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 KIAA1586Q9HCI6 787 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 PRSS16Q9NQE7 514 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 KRT82Q9NSB4 513 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 STK17AQ9UEE5 414 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 IL17BQ9UHF5 180 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 NUDT5Q9UKK9 219 aa11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 SPTAN1Q13813 2472 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-202ENST00000552829 A0A1W2PQH9 124 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 WNT9AO14904 365 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 CYP26A1O43174 497 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 MT-CO3P00414 261 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 RARGP13631 454 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 ATICP31939 592 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 VAC14Q08AM6 782 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 BNIP3Q12983 259 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 PSMD6Q15008 389 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 COLEC12Q5KU26 742 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 CDCP2Q5VXM1 449 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 USP30Q70CQ3 517 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 SCD5Q86SK9 330 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 ACOT1Q86TX2 421 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 DHX40Q8IX18 779 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 CRYBG2Q8N1P7 616 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 NAF1Q96HR8 494 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 EPSTI1Q96J88 318 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 TNIP3Q96KP6 325 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 CIPCQ9C0C6 399 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 SDCBP2Q9H190 292 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 HSPBP1Q9NZL4 362 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 NXF1Q9UBU9 619 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 TDRD6O60522 2096 aaKnown RBP11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 BSNQ9UPA5 3926 aa11.91□□□□□ -0.5
SUPT16H-202ENST00000552829 CCDC130P13994 396 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 CD38P28907 300 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 GALCP54803 685 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 MAP3K7CLP57077 242 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 ERVPABLB-1P60509 514 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 E2F1Q01094 437 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 CYP24A1Q07973 514 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 BMT2Q1RMZ1 405 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 CLEC17AQ6ZS10 378 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 ZC3H3Q8IXZ2 948 aaKnown RBP11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 PLPP6Q8IY26 295 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 ZNF366Q8N895 744 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 SLC2A14Q8TDB8 520 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 SYAP1Q96A49 352 aaPredicted RBP11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 SKA1Q96BD8 255 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 DPH1Q9BZG8 443 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 DCLK3Q9C098 648 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 ASCL3Q9NQ33 180 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 GDF3Q9NR23 364 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 AGO1Q9UL18 857 aaKnown RBP11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 PCDHB1Q9Y5F3 818 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 ATP6V1DQ9Y5K8 247 aa11.9□□□□□ -0.5
SUPT16H-202ENST00000552829 TERTO14746 1132 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 DNTTP04053 509 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 NTRK1P04629 796 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 PDIA4P13667 645 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 TNNI1P19237 187 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 HLA-FP30511 346 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 CORO1AP31146 461 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 LSSP48449 732 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 KIF11P52732 1056 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 NXPH1P58417 271 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 COG7P83436 770 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 SKOR1P84550 965 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 SNRNP35Q16560 246 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 FNDC3BQ53EP0 1204 aaKnown RBP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 KDM7AQ6ZMT4 941 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 CLEC20AQ6ZU45 233 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 SV2BQ7L1I2 683 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.89□□□□□ -0.51
SUPT16H-202ENST00000552829 WFIKKN2Q8TEU8 576 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms