RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 TIMP1P01033 207 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 ABHD2P08910 425 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 HSPA8P11142 646 aaKnown RBP11.2□□□□□ -0.62
PFDN5-216ENST00000552341 CPB1P15086 417 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 NR1D1P20393 614 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 ARPP19P56211 112 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
PFDN5-216ENST00000552341 HIF1AQ16665 826 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 SLC8B1Q6J4K2 584 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 MSANTD2Q6P1R3 559 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 KDM7AQ6ZMT4 941 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 TMCO2Q7Z6W1 182 aaPredicted RBP11.2□□□□□ -0.62
PFDN5-216ENST00000552341 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 FBXO22Q8NEZ5 403 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 CCDC110Q8TBZ0 833 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 GPR152Q8TDT2 470 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 IGSF21Q96ID5 467 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 SPATA17Q96L03 361 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 OXCT2Q9BYC2 517 aaPredicted RBP11.2□□□□□ -0.62
PFDN5-216ENST00000552341 CENPHQ9H3R5 247 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 MTRRQ9UBK8 725 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 SFMBT1Q9UHJ3 866 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 NUDT5Q9UKK9 219 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 NOVA2Q9UNW9 492 aaKnown RBP11.2□□□□□ -0.62
PFDN5-216ENST00000552341 PTPRSQ13332 1948 aa11.2□□□□□ -0.62
PFDN5-216ENST00000552341 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 KCNU1A8MYU2 1149 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 RASGRF2O14827 1237 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 KIAA0355O15063 1070 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 MSI1O43347 362 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 LRIG2O94898 1065 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 METTL18O95568 372 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 HAPLN1P10915 354 aaPredicted RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CSF2RAP15509 400 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 MAGEA9P43362 315 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 GLUD2P49448 558 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 ZNF135P52742 658 aaPredicted RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 TPI1P60174 286 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 BASP1P80723 227 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DEFB103AP81534 67 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 LONRF1Q17RB8 773 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DNAJC21Q5F1R6 531 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 BRMS1LQ5PSV4 323 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 HP1BP3Q5SSJ5 553 aaPredicted RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 C6orf118Q5T5N4 469 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 LEKR1Q6ZMV7 388 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DENND5BQ6ZUT9 1274 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CENPUQ71F23 418 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 BZW1Q7L1Q6 419 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 NPWQ8N729 165 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 TFB1MQ8WVM0 346 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 HTR3CQ8WXA8 447 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 SLC39A13Q96H72 371 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 PRDM12Q9H4Q4 367 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 EURLQ9NYK6 297 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 XPO7Q9UIA9 1087 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CDY1Q9Y6F8 540 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 NUP205Q92621 2012 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CLUHO75153 1309 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DUSP4Q13115 394 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 PPP2R5DQ14738 602 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 USP41Q3LFD5 358 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 MANEALQ5VSG8 457 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 ICE2Q659A1 982 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 HEATR6Q6AI08 1181 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 C4orf22Q6V702 233 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 ZBED8Q8IZ13 594 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 AGGF1Q8N302 714 aaeCLIP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 C2orf15Q8WU43 125 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DPF3Q92784 378 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 SERPINB12Q96P63 405 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 HAPLN3Q96S86 360 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 KLC2Q9H0B6 622 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 ETNK1Q9HBU6 452 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 CLIC5Q9NZA1 410 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 GMIPQ9P107 970 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 SLC12A6Q9UHW9 1150 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 RAD54BQ9Y620 910 aa11.19□□□□□ -0.62
PFDN5-216ENST00000552341 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.19□□□□□ -0.62
PFDN5-216ENST00000552341 TLDC2A0PJX2 215 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 PAGE1O75459 146 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 ATF6P18850 670 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 GCAP28676 217 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 HOXC13P31276 330 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 CCR1P32246 355 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 ARL4CP56559 192 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 GPX6P59796 221 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
PFDN5-216ENST00000552341 WASHC5Q12768 1159 aa11.18□□□□□ -0.62
PFDN5-216ENST00000552341 PDK1Q15118 436 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms