RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 EHHADHQ08426 723 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 C3orf38Q5JPI3 329 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 ZNF776Q68DI1 518 aaPredicted RBP15.12■□□□□ 0.01
VPS29-209ENST00000551655 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 TMC6Q7Z403 805 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 DENND1CQ8IV53 801 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 LSMEM2Q8N112 164 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 SKA1Q96BD8 255 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 SERAC1Q96JX3 654 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 LLPHQ9BRT6 129 aaKnown RBP15.12■□□□□ 0.01
VPS29-209ENST00000551655 OSBPL2Q9H1P3 480 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 NEUROG2Q9H2A3 272 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 PABPC3Q9H361 631 aaKnown RBP15.12■□□□□ 0.01
VPS29-209ENST00000551655 THSD1Q9NS62 852 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 FAM49BQ9NUQ9 324 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 WDR70Q9NW82 654 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 SATB2Q9UPW6 733 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 SCML2Q9UQR0 700 aa15.12■□□□□ 0.01
VPS29-209ENST00000551655 NOTCH2Q04721 2471 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 A0A1B0GVM2 712 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 ZNF233A6NK53 670 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 HHLA1C9JL84 531 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 SUV39H1O43463 412 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 OPA1O60313 960 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 CHKAP35790 457 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 RXRGP48443 463 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 E2F1Q01094 437 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 ZBTB16Q05516 673 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 UBAP2LQ14157 1087 aaKnown RBP15.11■□□□□ 0.01
VPS29-209ENST00000551655 ZSCAN23Q3MJ62 389 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 RILPL1Q5EBL4 403 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 ARL6IP4Q66PJ3 421 aaKnown RBP15.11■□□□□ 0.01
VPS29-209ENST00000551655 HIST2H2BCQ6DN03 193 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 CHST9Q7L1S5 443 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 ADIPOR2Q86V24 386 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 RDH13Q8NBN7 331 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 DNAJC19Q96DA6 116 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 XYLT2Q9H1B5 865 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 CSNK1G1Q9HCP0 422 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 IGSF5Q9NSI5 407 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 STARD5Q9NSY2 213 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 NAGPAQ9UK23 515 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 NCKAP1Q9Y2A7 1128 aa15.11■□□□□ 0.01
VPS29-209ENST00000551655 USP9YO00507 2555 aaPredicted RBP15.1■□□□□ 0.01
VPS29-209ENST00000551655 MID1O15344 667 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 FFAR2O15552 330 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 EFSO43281 561 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 SLC26A4O43511 780 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 CYBBP04839 570 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 FAM163BP0C2L3 166 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 ITGB6P18564 788 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 TNNI1P19237 187 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 HOXD9P28356 352 aaPredicted RBP15.1■□□□□ 0.01
VPS29-209ENST00000551655 ADORA2BP29275 332 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 PPP2CBP62714 309 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 PPP2CAP67775 309 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
VPS29-209ENST00000551655 SKOR1P84550 965 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 EFEMP1Q12805 493 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 KLHDC10Q6PID8 442 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 SLC25A45Q8N413 288 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 C12orf29Q8N999 325 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 ZNF516Q92618 1163 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 CCDC127Q96BQ5 260 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 AK8Q96MA6 479 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 DEPDC7Q96QD5 511 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 RSPH9Q9H1X1 276 aaPredicted RBP15.1■□□□□ 0.01
VPS29-209ENST00000551655 ABCB8Q9NUT2 735 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 UCKL1Q9NWZ5 548 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 PLA2G4CQ9UP65 541 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
VPS29-209ENST00000551655 C10orf142B7Z368 130 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 TIMM44O43615 452 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
VPS29-209ENST00000551655 CLSTN1O94985 981 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
VPS29-209ENST00000551655 FAM87AP0C7U9 286 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 TLE1Q04724 770 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 SRSF6Q13247 344 aaKnown RBP15.09■□□□□ 0.01
VPS29-209ENST00000551655 CLN3Q13286 438 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 KIF26BQ2KJY2 2108 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 USP30Q70CQ3 517 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 OR2T34Q8NGX1 318 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 WFDC5Q8TCV5 224 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 EXTL1Q92935 676 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 SLC2A11Q9BYW1 496 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 ERVMER34-1Q9H9K5 563 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 HSPBP1Q9NZL4 362 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 SEL1LQ9UBV2 794 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 LIMCH1Q9UPQ0 1083 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 CA5BQ9Y2D0 317 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 ZNF510Q9Y2H8 683 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
VPS29-209ENST00000551655 NYNRINQ9P2P1 1898 aaKnown RBP15.09■□□□□ 0.01
VPS29-209ENST00000551655 TDRD6O60522 2096 aaKnown RBP15.08■□□□□ 0.01
VPS29-209ENST00000551655 ANKRD17O75179 2603 aaKnown RBP15.08■□□□□ 0
VPS29-209ENST00000551655 SIN3BO75182 1162 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms