RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 FBXO32Q969P5 355 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 FBXO44Q9H4M3 255 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 GREB1Q4ZG55 1949 aa20.34■□□□□ 0.85
SSH1-209ENST00000551165 GABPB1Q06547 395 aaPredicted RBP20.33■□□□□ 0.85
SSH1-209ENST00000551165 BTG3Q14201 252 aaPredicted RBP20.33■□□□□ 0.85
SSH1-209ENST00000551165 LONRF1Q17RB8 773 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 SLC8B1Q6J4K2 584 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 MFSD5Q6N075 450 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 CAPN12Q6ZSI9 719 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 C16orf59Q7L2K0 433 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 TFB1MQ8WVM0 346 aaKnown RBP20.33■□□□□ 0.85
SSH1-209ENST00000551165 AUTS2Q8WXX7 1259 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 TSPYL1Q9H0U9 437 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 PRDM12Q9H4Q4 367 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 NEU3Q9UQ49 428 aa20.33■□□□□ 0.85
SSH1-209ENST00000551165 FAM92AA1XBS5 289 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 GOLGA6L10A6NI86 522 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 PAGE1O75459 146 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 MOCS2O96007 188 aaPredicted RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 EPHB2P29323 1055 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 EIF3BP55884 814 aaKnown RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 PDIA2Q13087 525 aaKnown RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 PKN2Q16513 984 aaKnown RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 KIAA1841Q6NSI8 718 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 PCGF5Q86SE9 256 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 RELL1Q8IUW5 271 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 ZBED8Q8IZ13 594 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 FAM76AQ8TAV0 307 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 DEPDC1BQ8WUY9 529 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 TRIM62Q9BVG3 475 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 ETNK1Q9HBU6 452 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 MAGED2Q9UNF1 606 aaPredicted RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 NOVA2Q9UNW9 492 aaKnown RBP20.32■□□□□ 0.84
SSH1-209ENST00000551165 AVILO75366 819 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 SEC24AO95486 1093 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 AP1B1Q10567 949 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 KCNJ11Q14654 390 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 SLC39A11Q8N1S5 342 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 CCNYQ8ND76 341 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 PAK5Q9P286 719 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 NUP205Q92621 2012 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 PTPRSQ13332 1948 aa20.32■□□□□ 0.84
SSH1-209ENST00000551165 CFAP69A5D8W1 941 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 ATP1A2P50993 1020 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 HIF1AQ16665 826 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 HEATR6Q6AI08 1181 aaKnown RBP20.31■□□□□ 0.84
SSH1-209ENST00000551165 HTR3CQ8WXA8 447 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 P2RY11Q96G91 374 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.31■□□□□ 0.84
SSH1-209ENST00000551165 CCR1P32246 355 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 HCAR3P49019 387 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 EFEMP1Q12805 493 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 PRKD1Q15139 912 aaPredicted RBP20.31■□□□□ 0.84
SSH1-209ENST00000551165 TTC19Q6DKK2 380 aaPredicted RBP20.31■□□□□ 0.84
SSH1-209ENST00000551165 AGGF1Q8N302 714 aaeCLIP20.31■□□□□ 0.84
SSH1-209ENST00000551165 ZNF558Q96NG5 402 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 FOXP3Q9BZS1 431 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 CTNNAL1Q9UBT7 734 aa20.31■□□□□ 0.84
SSH1-209ENST00000551165 LAMA3Q16787 3333 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 FOXO6A8MYZ6 492 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 HPDP32754 393 aaPredicted RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 ACTN2P35609 894 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 IFI35P80217 286 aaPredicted RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 RWDD4Q6NW29 188 aaKnown RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 C14orf80Q86SX3 495 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 HOOK3Q86VS8 718 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 MIB1Q86YT6 1006 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 CELF6Q96J87 481 aaKnown RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 SPATA17Q96L03 361 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 FCRL2Q96LA5 508 aaPredicted RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 EPAS1Q99814 870 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 OSBPL2Q9H1P3 480 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 SLC38A8A6NNN8 435 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 KCNU1A8MYU2 1149 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 HMGB1P1B2RPK0 211 aaPredicted RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 KCNK1O00180 336 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 ALOX15BO15296 676 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 GCATO75600 419 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 SOD2P04179 222 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 EN2P19622 333 aaPredicted RBP20.3■□□□□ 0.84
SSH1-209ENST00000551165 DNAJB2P25686 324 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 CENPUQ71F23 418 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 IGDCC3Q8IVU1 814 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 TMEM199Q8N511 208 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 TMEM106CQ9BVX2 250 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 CCSER2Q9H7U1 834 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSH1-209ENST00000551165 SEPT10Q9P0V9 454 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 BACE2Q9Y5Z0 518 aa20.3■□□□□ 0.84
SSH1-209ENST00000551165 C5orf60A6NFR6 353 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 HSPA1AP0DMV8 641 aaKnown RBP20.29■□□□□ 0.84
SSH1-209ENST00000551165 HSPA1BP0DMV9 641 aaKnown RBP20.29■□□□□ 0.84
SSH1-209ENST00000551165 MAGOHP61326 146 aaKnown RBP20.29■□□□□ 0.84
SSH1-209ENST00000551165 BRMS1LQ5PSV4 323 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 TMEM169Q96HH4 297 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 NDFIP2Q9NV92 336 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 HS3ST4Q9Y661 456 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 MYO18AQ92614 2054 aaKnown RBP20.29■□□□□ 0.84
SSH1-209ENST00000551165 PIAS1O75925 651 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms