RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ABCC13Q9NSE7 274 aa13.42□□□□□ -0.26
PTCH1-221ENST00000550914 KIAA1522Q9P206 1035 aaPredicted RBP13.42□□□□□ -0.26
PTCH1-221ENST00000550914 TSPAN16Q9UKR8 245 aa13.42□□□□□ -0.26
PTCH1-221ENST00000550914 PCOLCE2Q9UKZ9 415 aa13.42□□□□□ -0.26
PTCH1-221ENST00000550914 PLA2G4CQ9UP65 541 aa13.42□□□□□ -0.26
PTCH1-221ENST00000550914 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
PTCH1-221ENST00000550914 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 LOC400499M0QZD8 3231 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 CELSR3Q9NYQ7 3312 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 ADAMTS20P59510 1910 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 TBXAS1P24557 533 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 HLA-FP30511 346 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 FKBP3Q00688 224 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 ADIGQ0VDE8 80 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 GOLGA7BQ2TAP0 167 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 BSPRYQ5W0U4 402 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 LRSAM1Q6UWE0 723 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 ZC3H3Q8IXZ2 948 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 AHI1Q8N157 1196 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 SIX6OS1Q8N1H7 587 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 BAHD1Q8TBE0 780 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 TMA16Q96EY4 203 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 GAREM1Q9H706 876 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 TM7SF3Q9NS93 570 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 RMND1Q9NWS8 449 aa13.41□□□□□ -0.26
PTCH1-221ENST00000550914 EIF2B4Q9UI10 523 aaKnown RBP13.41□□□□□ -0.26
PTCH1-221ENST00000550914 TULP2O00295 520 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 FLRT2O43155 660 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 IRAK2O43187 625 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 ATP5BP06576 529 aaKnown RBP13.4□□□□□ -0.26
PTCH1-221ENST00000550914 VDRP11473 427 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 BNC1Q01954 994 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 RING1Q06587 406 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 HLA-BQ31612 363 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 PKDCCQ504Y2 493 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 FNDC3BQ53EP0 1204 aaKnown RBP13.4□□□□□ -0.26
PTCH1-221ENST00000550914 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 TCERG1LQ5VWI1 586 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 MSANTD2Q6P1R3 559 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 CCNI2Q6ZMN8 369 aaPredicted RBP13.4□□□□□ -0.26
PTCH1-221ENST00000550914 ADIPOR2Q86V24 386 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 IRGQQ8WZA9 623 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 GOLGA1Q92805 767 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 EEF2KMTQ96G04 330 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 CDC6Q99741 560 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 TSG101Q99816 390 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 GTPBP4Q9BZE4 634 aaKnown RBP13.4□□□□□ -0.26
PTCH1-221ENST00000550914 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 GOLPH3LQ9H4A5 285 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 SFMBT1Q9UHJ3 866 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 GGA2Q9UJY4 613 aa13.4□□□□□ -0.26
PTCH1-221ENST00000550914 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
PTCH1-221ENST00000550914 YJEFN3A6XGL0 299 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 E7ENQ6 273 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 TAF4O00268 1085 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 O00370 1275 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 TSPAN3O60637 253 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 IGLV3-27P01718 113 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 PAEPP09466 180 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 DLDP09622 509 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 PABPC1P11940 636 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 HLA-EP13747 358 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 CD19P15391 556 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 PRCPP42785 496 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 DAOAP59103 153 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SCAPQ12770 1279 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SUZ12Q15022 739 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 TEAD4Q15561 434 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 NUGGCQ68CJ6 796 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 CHST9Q7L1S5 443 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 UNC45BQ8IWX7 931 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SMYD4Q8IYR2 804 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 UBR7Q8N806 425 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SETD7Q8WTS6 366 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 NDRG1Q92597 394 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 EDEM1Q92611 657 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 AZIN2Q96A70 460 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 GSDMAQ96QA5 445 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 IL21RQ9HBE5 538 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 ABCB8Q9NUT2 735 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 ARMCX3Q9UH62 379 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SUN2Q9UH99 717 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 LHX6Q9UPM6 363 aa13.39□□□□□ -0.27
PTCH1-221ENST00000550914 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 SMG1Q96Q15 3661 aaKnown RBP13.39□□□□□ -0.27
PTCH1-221ENST00000550914 A0A1B0GVT2 93 aa13.38□□□□□ -0.27
PTCH1-221ENST00000550914 PMM2O15305 246 aa13.38□□□□□ -0.27
PTCH1-221ENST00000550914 DKK1O94907 266 aa13.38□□□□□ -0.27
PTCH1-221ENST00000550914 SEMA4FO95754 770 aa13.38□□□□□ -0.27
PTCH1-221ENST00000550914 ACSL1P33121 698 aa13.38□□□□□ -0.27
PTCH1-221ENST00000550914 GRIA4P48058 902 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms