RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 PDZD4Q76G19 769 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ZBED8Q8IZ13 594 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 TFB1MQ8WVM0 346 aaKnown RBP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 NDRG1Q92597 394 aaKnown RBP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 SEPT8Q92599 483 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 CEP295NLQ96MC4 621 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 TOX2Q96NM4 488 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 CASD1Q96PB1 797 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 UNC93B1Q9H1C4 597 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ACSS3Q9H6R3 686 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 SSU72Q9NP77 194 aaKnown RBP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 EIF2B3Q9NR50 452 aaKnown RBP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ABCC13Q9NSE7 274 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ETNK2Q9NVF9 386 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 ARHGEF38Q9NXL2 777 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 BCCIPQ9P287 314 aaKnown RBP eCLIP9.49□□□□□ -0.89
TMEM116-213ENST00000550831 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 VWA8A3KMH1 1905 aa9.49□□□□□ -0.89
TMEM116-213ENST00000550831 A0A0A0MRY4 1105 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TCRBV7S3A2A0A539 114 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TLDC2A0PJX2 215 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 OR6C75A6NL08 312 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 I3L4J1 428 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 EEF2KO00418 725 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TRIM66O15016 1216 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TBC1D4O60343 1298 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 OPHN1O60890 802 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 EFEMP2O95967 443 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FAM107AO95990 144 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MLNP12872 115 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 NCAM1P13591 858 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ATP2A2P16615 1042 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FGFR3P22607 806 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 AMPD1P23109 780 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 HOXC13P31276 330 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ELAVL2Q12926 359 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PPP2R5DQ14738 602 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FASTKD3Q14CZ7 662 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 KLHL38Q2WGJ6 581 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 DNAJC21Q5F1R6 531 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MSANTD2Q6P1R3 559 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ADGRD1Q6QNK2 874 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SPATS2Q86XZ4 545 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SPATA2LQ8IUW3 424 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 KLHDC8BQ8IXV7 354 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SLC7A14Q8TBB6 771 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 DQX1Q8TE96 717 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PYROXD1Q8WU10 500 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ATXN2LQ8WWM7 1075 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 HTR3CQ8WXA8 447 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ARHGEF2Q92974 986 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SPATA13Q96N96 652 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 XPO6Q96QU8 1125 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 HAPLN3Q96S86 360 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TMEM209Q96SK2 561 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FERMT1Q9BQL6 677 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 WDR83Q9BRX9 315 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MRPL9Q9BYD2 267 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SMOC2Q9H3U7 446 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 C10orf88Q9H8K7 445 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 XAB2Q9HCS7 855 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FNIP2Q9P278 1114 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 IGSF9Q9P2J2 1179 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 XPO7Q9UIA9 1087 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 RABGEF1Q9UJ41 708 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SCML2Q9UQR0 700 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ALPK3Q96L96 1907 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ATXN2Q99700 1313 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 FNDC1Q4ZHG4 1894 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 EXOC1LA0A1B0GW35 172 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 GMNCA6NCL1 334 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 I6L893 689 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PPP1R12AO14974 1030 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 IRAK2O43187 625 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MTSS1O43312 755 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MFSD11O43934 449 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 SLC5A3P53794 718 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PRSS12P56730 875 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 GEMIN4P57678 1058 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 BASP1P80723 227 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 PAN2Q504Q3 1202 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ACBD5Q5T8D3 534 aaPredicted RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MANEALQ5VSG8 457 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 HEATR6Q6AI08 1181 aaKnown RBP9.48□□□□□ -0.89
TMEM116-213ENST00000550831 TRABD2AQ86V40 505 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 MON1AQ86VX9 555 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 CCDC13Q8IYE1 715 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 VPS52Q8N1B4 723 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ARHGAP18Q8N392 663 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 ZNF276Q8N554 614 aa9.48□□□□□ -0.89
TMEM116-213ENST00000550831 BCAS4Q8TDM0 211 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms