RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ATF7P17544 494 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 KRT15P19012 456 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 PAX3P23760 479 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 GTF2H1P32780 548 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 EPHB4P54760 987 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 JAM2P57087 298 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TPM4P67936 248 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 PFKPQ01813 784 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 CYP24A1Q07973 514 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 PSMD6Q15008 389 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 IQCB1Q15051 598 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TPD52L1Q16890 204 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TCTN1Q2MV58 587 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 BTBD8Q5XKL5 378 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 CRELD2Q6UXH1 353 aaPredicted RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ALKAL1Q6UXT8 129 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF365Q70YC5 407 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 FAM124AQ86V42 546 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 PTRH1Q86Y79 214 aaKnown RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 BRSK2Q8IWQ3 736 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 FAM186BQ8IYM0 893 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 THNSL1Q8IYQ7 743 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 LGI4Q8N135 537 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 GSTCDQ8NEC7 633 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ZSWIM2Q8NEG5 633 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 ANKRD20A12PQ8NF67 263 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TOP1MTQ969P6 601 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SNX27Q96L92 541 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 MRPL9Q9BYD2 267 aaKnown RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM117Q9H0C3 514 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM168Q9H0V1 697 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 RPF1Q9H9Y2 349 aaKnown RBP6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SLC38A7Q9NVC3 462 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SMPD4Q9NXE4 827 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 C2CD2Q9Y426 696 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 NFE2L3Q9Y4A8 694 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 PCDHB7Q9Y5E2 793 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SLC4A7Q9Y6M7 1214 aa6.18□□□□□ -1.42
SCAF11-213ENST00000550629 SMIM28A0A1B0GU29 152 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 A0A1W2PPC1 479 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CCDC66A2RUB6 948 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 TRIM49BA6NDI0 452 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ARL5CA6NH57 179 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF839A8K0R7 811 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 BECN2A8MW95 431 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 GOLGA6L19H0YKK7 550 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 PMM2O15305 246 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 RECQL4O94761 1208 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 RASGRP1O95267 797 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CXCL8P10145 99 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 HARSP12081 509 aaKnown RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 PTPN1P18031 435 aaKnown RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CYP3A5P20815 502 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 GLRBP48167 497 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ACOT2P49753 483 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 VAMP7P51809 220 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 STX17P56962 302 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 HTRA4P83105 476 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 BFSP1Q12934 665 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 GRIK3Q13003 919 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ZBTB6Q15916 424 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 C2orf27AQ580R0 203 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 TRIM61Q5EBN2 209 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 TCP11X2Q5H9J9 407 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 NOMO2Q5JPE7 1267 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ZBTB41Q5SVQ8 909 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 BORAQ6PGQ7 559 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 OTOP2Q7RTS6 562 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CDR2LQ86X02 465 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CBWD2Q8IUF1 395 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 WDR49Q8IV35 697 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 HERC6Q8IVU3 1022 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 DHX40Q8IX18 779 aaKnown RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 NLGN4XQ8N0W4 816 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 AOPEPQ8N6M6 819 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 URGCPQ8TCY9 931 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 CACTINQ8WUQ7 758 aaKnown RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 MBD6Q96DN6 1003 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 SAAL1Q96ER3 474 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 UROC1Q96N76 676 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 RSAD1Q9HA92 442 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 RIC8BQ9NVN3 520 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 FANCLQ9NW38 375 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 MAGEC2Q9UBF1 373 aaPredicted RBP6.17□□□□□ -1.42
SCAF11-213ENST00000550629 FTSJ1Q9UET6 329 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 ZFP69BQ9UJL9 534 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 HES2Q9Y543 173 aa6.17□□□□□ -1.42
SCAF11-213ENST00000550629 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GTPBP10A4D1E9 387 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GOLGA8IPA6NC78 632 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GOLGA8JA6NMD2 632 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 LACTBL1A8MY62 500 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 KCNJ18B7U540 433 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF561-AS1K7EIQ3 104 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms